Thioredoxin domain explained

Thioredoxins[1] [2] [3] [4] are small disulfide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulfide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of 2 cysteine thiol groups to a disulfide, accompanied by the transfer of 2 electrons and 2 protons. The net result is the covalent interconversion of a disulfide and a dithiol.

TR-S2 + NADPH + H+ -> TR-(SH)2 + NADP+ (1)

trx-S2 + TR-(SH)2 -> trx-(SH)2 + TR-S2 (2)

Protein-S2 + trx-(SH)2 -> Protein-(SH)2 + trx-S2 (3)

In the NADPH-dependent protein disulfide reduction, thioredoxin reductase (TR) catalyses reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulfide (steps 1 and 2). Reduced thioredoxin then directly reduces the disulfide in the substrate protein (step 3).

Protein disulfide isomerase (PDI), a resident foldase of the endoplasmic reticulum, is a multi-functional protein that catalyses the formation and isomerisation of disulfide bonds during protein folding.[5] [6] PDI contains 2 redox active domains, near the N- and C-termini, that are similar to thioredoxin: both contribute to disulfide isomerase activity, but are functionally non-equivalent. A mutant PDI, with all 4 of the active cysteines replaced by serine, displays a low but detectable level of disulfide isomerase activity.[6] Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulfide bonds, i.e. behaving independently of its disulfide isomerase activity.[7]

A number of endoplasmic reticulum proteins that differ from the PDI major isozyme contain 2 (ERp60, ERp5) or 3 (ERp72[8]) thioredoxin domains; all of them seem to be PDIs. 3D-structures have been determined for a number of thioredoxins.[9] The molecule has a doubly wound alternating alpha/beta fold, consisting of a 5-stranded parallel beta-sheet core, enclosed by 4 alpha-helices. The active site disulfide is located at the N-terminus of helix 2 in a short segment that is separated from the rest of the helix by a kink caused by a conserved proline. The 4-membered disulfide ring is located on the surface of the protein. A flat hydrophobic surface lies adjacent to the disulfide, which presumably facilitates interaction with other proteins.

One invariant feature of all thioredoxins is a cis-proline located in a loop preceding beta-strand 4. This residue is positioned in van der Waals contact with the active site cysteines and is important both for stability and function. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulfide isomerase DsbA, and the N-terminal domain of glutathione transferase. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins.

Human proteins containing thioredoxin domain

DNAJC10

ERP70; GLRX3; P4HB; PDIA2 (PDIP); PDIA3; PDIA4;PDIA5
  • PDIA6; PDILT; QSOX1; QSOX2; STRF8; TXN;TXN2
  • TXNDC1; TXNDC10; TXNDC11; TXNDC13; TXNDC14; TXNDC15; TXNDC16;TXNDC2
  • TXNDC3; TXNDC4; TXNDC5; TXNDC6; TXNDC8; TXNL1; TXNL3;
  • Notes and References

    1. Holmgren A . Thioredoxin . Annu. Rev. Biochem. . 54 . 237–271 . 1985 . 3896121 . 10.1146/annurev.bi.54.070185.001321.
    2. Holmgren A . Thioredoxin and glutaredoxin systems . J. Biol. Chem. . 264 . 24 . 13963–13966 . 1989 . 10.1016/S0021-9258(18)71625-6 . 2668278 . free .
    3. Holmgren A . Thioredoxin structure and mechanism: conformational changes on oxidation of the active-site sulfhydryls to a disulfide . Structure . 3 . 3 . 239–243 . 1995 . 7788289 . 10.1016/s0969-2126(01)00153-8. free .
    4. Martin JL . Thioredoxin--a fold for all reasons . Structure . 3 . 3 . 245–250 . 1995 . 7788290 . 10.1016/S0969-2126(01)00154-X. free .
    5. Puig A, Lyles MM, Noiva R, Gilbert HF . The role of the thiol/disulfide centers and peptide binding site in the chaperone and anti-chaperone activities of protein disulfide isomerase . J. Biol. Chem. . 269 . 29 . 19128–19135 . 1994 . 10.1016/S0021-9258(17)32284-6 . 7913469 . free .
    6. Lyles MM, Gilbert HF . Mutations in the thioredoxin sites of protein disulfide isomerase reveal functional nonequivalence of the N- and C-terminal domains . J. Biol. Chem. . 269 . 49 . 30946–30952 . 1994 . 10.1016/S0021-9258(18)47373-5 . 7983029 . free .
    7. Wang CC, Song JL . Chaperone-like activity of protein disulfide-isomerase in the refolding of rhodanese . Eur. J. Biochem. . 231 . 2 . 312–316 . 1995 . 7635143 . 10.1111/j.1432-1033.1995.tb20702.x.
    8. Mazzarella RA, Srinivasan M, Haugejorden SM, Green M . ERp72, an abundant luminal endoplasmic reticulum protein, contains three copies of the active site sequences of protein disulfide isomerase . J. Biol. Chem. . 265 . 2 . 1094–1101 . 1990 . 10.1016/S0021-9258(19)40163-4 . 2295602 . free .
    9. Gleason FK, Eklund H, Saarinen M . Crystal structure of thioredoxin-2 from Anabaena . Structure . 3 . 10 . 1097–1108 . 1995 . 8590004 . 10.1016/s0969-2126(01)00245-3. free .