Rubella virus 3′ cis-acting element explained

Rubella virus 3′ cis-acting element
Symbol:Rubella_3
Altsymbols:Rubella_cis_act
Rfam:RF00194
Rna Type:Cis-reg
Tax Domain:Viruses

The Rubella virus 3′ cis-acting element RNA family represents a cis-acting element found at the 3′ UTR in the rubella virus. This family contains three conserved step loop structures.[1] Calreticulin (CAL), which is known to bind calcium in most eukaryotic cells, is able to specifically bind to the first stem loop of this RNA. CAL binding is thought to be related to viral pathogenesis and in particular arthritis which occurs frequently in rubella infections in adults and is independent of viral viability. All stem loop structures are thought to be important for efficient viral replication and deletion of stem loop three is known to be lethal.

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Notes and References

  1. Chen MH, Frey TK . Mutagenic analysis of the 3′ cis-acting elements of the rubella virus genome . Journal of Virology . 73 . 4 . 3386–3403 . April 1999 . 10.1128/JVI.73.4.3386-3403.1999 . 10074193 . 104103 .