This is a list of the horse breeds usually considered to be native to Indonesia. Some may have complex or obscure histories, so inclusion here does not necessarily imply that a breed is predominantly or exclusively Indonesian.
| Local name | English name if used | Numbers | Region | Notes |
|---|---|---|---|---|
| Agam | 1,500 | |||
| 1,250; 3,500 | ||||
| 12,000; 7,500 | also known as Deli Pony | |||
| Bima | 50,000; 140,000 | variety of Sumbawa | ||
| Flores | 20,000; 25,000 | |||
| 2,500; 7,500 | West Sumatra, Aceh | |||
| Gorontalo | 2,000 | |||
| 30,000; 50,000 | ||||
| Kaili | 10,000 | North Sulawesi | ||
| Kalimantan | 3,500 | |||
| Kuda-Pacu Indonesia | Indonesian Racing Horse | 4,500 | F4 cross of Sandel and Thoroughbred | |
| Kuningan | 7,500; 15,000 | West Java | ||
| Lombok | 5,000 | Lombok, Nusa Tenggara Barat | ||
| Makasar | Macassar | 190,000; 215,000 | Sulawesi | |
| Minahasa | 5,000; 1,000 | North Sulawesi | cross-bred from Sandel and Thoroughbred, for racing | |
| Padang Mangatas | 1,000 | West Sumatra | ||
| Priangan | 7,000 | West Java | ||
| Rote (Kori) | 1,250 | |||
| Sandelwood, Sandel | 45,000; 55,000 | Sumba, Nusa Tenggara Timur | ||
| West Sumatra-Sandel-Arab | 5,000; 6,000 | West Sumatra | cross-bred since 1918 from Sandel and Thoroughbred | |
| 77,837 | Sumbawa | |||
| 20,000 | West Timor, Flores-Nusa Tenggara Timur | |||