| Tourney Name: | UEFA Intertoto Cup |
| Year: | 2000 |
| Dates: | 18 June 2000 – 22 August 2000 |
| Num Teams: | 60[1] |
| Champion Other: |  Celta Vigo UdineseStuttgart |
| Matches: | 114 |
| Goals: | 339 |
| Prevseason: | 1999 |
| Nextseason: | 2001 |
The 2000 UEFA Intertoto Cup finals were won by Udinese, Celta Vigo, and Stuttgart. All three teams advanced to the UEFA Cup.
----The game was awarded to Dinaburg with a score of 3–0 due to OD Trenčín fielding an ineligible player.------------The game was awarded to LASK Linz with a score of 3–0 due to Hapoel Petah Tikva fielding an ineligible player.------------------------------------------------------------
Pelister won 4–1 on aggregate.----Dinaburg won 4–0 on aggregate.----Zagłębie Lubin won 7–1 on aggregate.----Cibalia won 4–2 on aggregate.----LASK Linz won 4–1 on aggregate.----Nea Salamis Famagusta won 6–2 on aggregate.----Tatabánya won 7–0 on aggregate.----6–6 on aggregate, Leiftur won on away goals rule.----Slaven Belupo won 4–1 on aggregate.----Dnepr-Transmash Mogilev won 4–2 on aggregate.----Stabæk won 3–1 on aggregate.----3–3 on aggregate, Standard Liège won on away goals rule.----Primorje won 11–0 on aggregate.----Ceahlăul Piatra Neamţ won 9–4 on aggregate.----Nistru Otaci won 2–0 on aggregate.----1–1 on aggregate, Atlantas won on penalties.----2–2 on aggregate, Västra Frölunda on away goals rule.----Neuchâtel Xamax won 5–4 on aggregate.----Sigma Olomouc won 3–1 on aggregate.----3–3 on aggregate, Velbazhd Kyustendil won on away goals rule.
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Austria Salzburg won 7–2 on aggregate.----Zenit Saint Petersburg won 6–1 on aggregate.----Standard Liège won 3–2 on aggregate.----Austria Wien won 3–1 on aggregate.----The game was awarded to Auxerre with a score of 3–0 due to Stabæk fielding an ineligible player Denis Iliohen. Auxerre won 5–0 on aggregate.----AaB won 1–0 on aggregate.----Marila Příbram won 4–3 on aggregate.----Bradford City won 7–2 on aggregate.----Ceahlăul Piatra Neamţ won 4–3 on aggregate.----Chmel Blšany won 8–2 on aggregate.----Sedan won 6–2 on aggregate.----Stuttgart won 10–2 on aggregate.----1–1 on aggregate, Slaven Belupo won on away goals rule.----Tatabánya won 3–2 on aggregate.----Pelister won 3–1 on aggregate.----Sigma Olomouc won 8–2 on aggregate.
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Celta Vigo won 5–1 on aggregate.----Udinese won 3–2 on aggregate.----Wolfsburg won 2–1 on aggregate.----Aston Villa won 3–1 on aggregate.----Chmel Blšany won 8–0 on aggregate.----2–2 on aggregate, Stuttgart won on away goals rule.----Bradford City won 3–0 on aggregate.----Auxerre won 5–1 on aggregate.----Sigma Olomouc won 3–1 on aggregate.----Standard Liège won 4–2 on aggregate.----Austria Wien won 5–2 on aggregate.----Zenit Saint Petersburg won 4–2 on aggregate.
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Sigma Olomouc won 3–1 on aggregate.----Stuttgart won 2–1 on aggregate.----Zenit Saint Petersburg won 4–0 on aggregate.----Celta Vigo won 3–1 on aggregate.----Udinese won 3–0 on aggregate.----Auxerre won 3–2 on aggregate.
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Celta Vigo won 4–3 on aggregate.----Stuttgart won 3–1 on aggregate.----Udinese won 6–4 on aggregate.