Streptomyces isolates explained

Streptomyces isolates have yielded the majority of human, animal, and agricultural antibiotics, as well as a number of fundamental chemotherapy medicines. Streptomyces is the largest antibiotic-producing genus of Actinomycetota, producing chemotherapy, antibacterial, antifungal, antiparasitic drugs, and immunosuppressants.[1] Streptomyces isolates are typically initiated with the aerial hyphal formation from the mycelium.[2]

Anticancer medicines

Streptomyces, yielded the medicines doxorubicin (Doxil), daunorubicin (DaunoXome), and streptozotocin (Zanosar). Doxorubicin is the precursor to valrubicin (Valstar), myocet, and pirarubicin. Daunorubicin is the precursor to idarubicin (Idamycin), epirubicin (Ellence), and zorubicin.

Streptomyces is the original source of dactinomycin (Cosmegen), bleomycin (Blenoxane), pingyangmycin (Bleomycin A5), mitomycin C (Mutamycin), rebeccamycin, staurosporine (precursor to stauprimide and midostaurin), neothramycin, aclarubicin, tomaymycin, sibiromycin, and mazethramycin.

Derivatives of Streptomycetes isolate migrastatin, including isomigrastatin, dorrigocin A & B, and the synthetic derivative macroketone, are being researched for anticancer activity.

Antibiotics

Most clinical antibiotics were found during the "golden age of antibiotics" (1940s–1960s). Actinomycin was the first antibiotic isolated from Streptomyces in 1940, followed by streptomycin three years later. Antibiotics from Streptomyces isolates (including various aminoglycosides) would go on to comprise over two-thirds of all marketed antibiotics.

Streptomyces-derived antibiotics include:

Clavulanic acid (Streptomyces clavuligerus) is used in combination with some antibiotics (such as amoxicillin) to weaken bacterial-resistance. Novel anti-infectives being developed include the guadinomines (from Streptomyces sp. K01-0509),[3] inhibitors of the type III secretion system.

Non-Streptomyces actinomycetes, filamentous fungi, and non-filamentous bacteria, have also yielded important antibiotics.

Antifungals

Nystatin (Streptomyces noursei), amphotericin B (Streptomyces nodosus), ossamycin (Streptomyces hygroscopicus), and natamycin (Streptomyces natalensis) are antifungals isolated from Streptomyces.

Immunosuppressants

Sirolimus (Rapamycin), ascomycin, and tacrolimus were isolated from Streptomyces. Pimecrolimus is a derivative of ascomycin. Ubenimex is derived from S. olivoreticuli.[4]

Antiparasitics

Streptomyces avermitilis synthesizes the antiparasitic ivermectin (Stromectol). Other antiparasitics made by Streptomyces include, milbemycin oxime, moxidectin, and milbemycin.

Biotechnology

Traditionally, Escherichia coli is the choice bacterium to express eukaryotic and recombinant genes. E. coli is well understood and has a successful track record producing insulin, the artemisinin precursor artemisinic acid, and filgrastim (Neupogen).[5] [6] However, use of E. coli has limitations including misfolding of eukaryotic proteins, insolubility issues, deposition in inclusion bodies,[7] low secretion efficiency, secretion to periplasmic space.

Streptomyces offers potential advantages including superior secretion mechanisms, higher yields, a simpler end-product purification process, making Streptomyces an attractive alternative to E. coli and Bacillus subtilis.[7]

Streptomyces coelicolor, Streptomyces avermitilis, Streptomyces griseus, and Saccharopolyspora erythraea, are capable of secondary metabolite production. Streptomyces coelicolor has shown useful for the heterologous expression of proteins. Methods like "ribosome engineering" have been used to achieve 180-fold higher yields with S. coelicolor.[8]

Other

StreptomeDB, a directory of Streptomyces isolates, contains over 2400 compounds isolated from more than 1900 strains.[9] [10] Streptomyces hygroscopicus and Streptomyces viridochromeogenes produce the herbicide bialaphos. Expansion of Streptomyces screenings have included endophytes, extremophiles, and marine varieties.

A recent screening of TCM extracts revealed a Streptomyces that produces a number of antitubercular pluramycins.[11] Wailupemycins are bio-active pyrones isolated from marine Streptomyces.[12]

Mayamycin has been shown to have cytotoxic properties.[13] [14]

Germicidin are a group of four compounds that act as autoregulatory inhibitors of spore germination.[15] [16]

External links

Notes and References

  1. Watve MG, Tickoo R, Jog MM, Bhole BD . How many antibiotics are produced by the genus Streptomyces? . Arch. Microbiol. . 176 . 5 . 386–90 . November 2001 . 11702082 . 10.1007/s002030100345 . 2001ArMic.176..386W . 603765 .
  2. Schrey . Silvia D. . etal . 2012 . Production of fungal and bacterial growth modulating secondary metabolites is widespread among mycorrhiza-associated streptomycetes . BMC Microbiology . 12 . 1. 164 . 10.1186/1471-2180-12-164. 22852578 . 3487804 . free .
  3. 23030602. 2012. Holmes. TC. May. AE. Zaleta-Rivera. K. Ruby. JG. Skewes-Cox. P. Fischbach. MA. Derisi. JL. Iwatsuki. M. Ōmura. S. Khosla. C. Molecular insights into the biosynthesis of guadinomine: A type III secretion system inhibitor. 134. 42. 17797–806. 10.1021/ja308622d. 3483642. Journal of the American Chemical Society.
  4. Bauvois. B. Dauzonne, D . Aminopeptidase-N/CD13 (EC 3.4.11.2) inhibitors: Chemistry, biological evaluations, and therapeutic prospects. Medicinal Research Reviews. 26. 1. 88–130. 10.1002/med.20044. 16216010. January 2006. 7168514.
  5. Brawner M, Poste G, Rosenberg M, Westpheling J . Streptomyces: a host for heterologous gene expression . Curr Opin Biotechnol . 2 . 5 . 674–81 . 1991 . 1367716 . 10.1016/0958-1669(91)90033-2.
  6. Payne G, DelaCruz N, Coppella S . Improved production of heterologous protein from Streptomyces lividans . Appl Microbiol Biotechnol . 33 . 4 . 395–400 . 1990 . 1369282 . 10.1007/BF00176653. 19287805 .
  7. Binnie C, Cossar J, Stewart D . Heterologous biopharmaceutical protein expression in Streptomyces . Trends Biotechnol . 15 . 8 . 315–20 . 1997 . 9263479 . 10.1016/S0167-7799(97)01062-7.
  8. Wang G, Hosaka T, Ochi K . Dramatic activation of antibiotic production in Streptomyces coelicolor by cumulative drug resistance mutations. . Appl Environ Microbiol . 2008 . 74 . 9 . 2834–40 . 18310410 . 10.1128/AEM.02800-07 . 2394871 . 2008ApEnM..74.2834W .
  9. Lucas X, Senger C, Erxleben A, Grüning BA, Döring K, Mosch J, etal . StreptomeDB: a resource for natural compounds isolated from Streptomyces species. . Nucleic Acids Res . 2013 . 41 . Database issue . D1130–6 . 23193280 . 10.1093/nar/gks1253 . 3531085 .
  10. Web site: | Pharmaceutical Bioinformatics. 2 November 2018.
  11. Liu M, Abdel-Mageed WM, Ren B, He W, Huang P, Li X, etal . Endophytic Streptomyces sp. Y3111 from traditional Chinese medicine produced antitubercular pluramycins. . Appl Microbiol Biotechnol . 2014 . 98 . 3 . 1077–85 . 10.1007/s00253-013-5335-6 . 24190497 . 15866711 .
  12. Book: Kalaitzis. John A. Metabolomics Tools for Natural Product Discovery. 2013. 978-1-62703-576-7. Methods in Molecular Biology. 1055. 171–189. Discovery, Biosynthesis, and Rational Engineering of Novel Enterocin and Wailupemycin Polyketide Analogues. 10.1007/978-1-62703-577-4_13. 23963911.
  13. Bo . Sheng Tao . Xu . Zi Fei . Yang . Li . Cheng . Ping . Tan . Ren Xiang . Jiao . Rui Hua . Ge . Hui Ming . June 2018 . Structure and biosynthesis of mayamycin B, a new polyketide with antibacterial activity from Streptomyces sp. 120454 . The Journal of Antibiotics . en . 71 . 6 . 601–605 . 10.1038/s41429-018-0039-x . 29515228 . 3720406 . 1881-1469.
  14. 20545334. 2010. Schneemann. I. Mayamycin, a cytotoxic polyketide from a Streptomyces strain isolated from the marine sponge Halichondria panicea. Journal of Natural Products. 73. 7. 1309–12. Kajahn. I. Ohlendorf. B. Zinecker. H. Erhard. A. Nagel. K. Wiese. J. Imhoff. J. F.. 10.1021/np100135b.
  15. Aoki . Y . Matsumoto, D . Kawaide, H . Natsume, M . September 2011 . Physiological role of germicidins in spore germination and hyphal elongation in Streptomyces coelicolor A3(2). . The Journal of Antibiotics . 64 . 9 . 607–11 . 10.1038/ja.2011.59 . 21792209 . free.
  16. Petersen . F . Zähner, H . Metzger, JW . Freund, S . Hummel, RP . July 1993 . Germicidin, an autoregulative germination inhibitor of Streptomyces viridochromogenes NRRL B-1551 . The Journal of Antibiotics . 46 . 7 . 1126–38 . 10.7164/antibiotics.46.1126 . 8360109 . free.