Sporolides Explained

Sporolides A and B are polycyclic macrolides extracted from the obligate marine bacterium Salinispora tropica, which is found in ocean sediment. They are composed of a chlorinated cyclopenta[a]indene ring and a cyclohexenone moiety.[1] They were the second group of compounds (after salinosporamide A) isolated from Salinispora, and were said to indicate the potential of marine actinomycetes as a source of novel secondary metabolites.[2] The structures and absolute stereochemistries of both metabolites were elucidated using a combination of NMR spectroscopy and X-ray crystallography.

The complex aromatic structure of the sporolides was hypothesized to be derived from an unstable nine-membered ring enediyne precursor, which could undergo Bergman cyclization to generate a para-benzyne intermediate. Nucleophilic attack by chloride would account for the 1:1 mixture of sporolide A and B and for the single chlorine in these enediyne-derived natural products. This proposed mechanism was demonstrated in laboratory experiments,[3]

Biosynthesis

The biosynthesis of sporolide A and B is related to that of enediynes such as dynemicin A[4] and is proposed to proceed as shown below.[1] [3]

Chemical synthesis

The first total synthesis of sporolide B was reported by K. C. Nicolaou's group and used a highly stereoselective and convergent strategy that involved two cycloaddition reactions. The first was a ruthenium-catalyzed intermolecular [2+2+2] cycloaddition reaction between two acetylenic units, A and B, and the second a thermally induced intramolecular [4+2] cycloaddition reaction between an o-quinone and the tetrasubstituted olefin within the intermediate, forming the macrocyclic structure of the target product.[5] [6]

Notes and References

  1. 10.1021/ja710488m . Unraveling the Biosynthesis of the Sporolide Cyclohexenone Building Block . 2008 . McGlinchey . Ryan P. . Nett . Markus . Moore . Bradley S. . Journal of the American Chemical Society . 130 . 8 . 2406–2407 . 18232689 .
  2. 10.1021/ol050901i . Sporolides a and b: Structurally Unprecedented Halogenated Macrolides from the Marine Actinomycete Salinisporatropica . 2005 . Buchanan . Greg O. . Williams . Philip G. . Feling . Robert H. . Kauffman . Christopher A. . Jensen . Paul R. . Fenical . William . Organic Letters . 7 . 13 . 2731–2734 . 15957933 .
  3. 10.1021/ja070023e . Nucleophilic Addition to a p-Benzyne Derived from an Enediyne: A New Mechanism for Halide Incorporation into Biomolecules . 2007 . Perrin . Charles L. . Rodgers . Betsy L. . O'Connor . Joseph M. . Journal of the American Chemical Society . 129 . 15 . 4795–4799 . 17378569 .
  4. 10.1007/s10295-015-1671-0 . Genome neighborhood network reveals insights into enediyne biosynthesis and facilitates prediction and prioritization for discovery . 2016 . Rudolf . Jeffrey D. . Yan . Xiaohui . Shen . Ben . Journal of Industrial Microbiology & Biotechnology . 43 . 2–3 . 261–276 . 26318027 . 4753101 .
  5. 10.1002/anie.200900264 . Total Synthesis of Sporolide B . 2009 . Nicolaou . K. C. . Tang . Yefeng . Wang . Jianhua . Angewandte Chemie International Edition . 48 . 19 . 3449–3453 . 19241430 . 2674522 .
  6. 10.1021/ja1048994 . Total Synthesis of Sporolide B and 9-epi-Sporolide B . 2010 . Nicolaou . K. C. . Wang . Jianhua . Tang . Yefeng . Botta . Lorenzo . Journal of the American Chemical Society . 132 . 32 . 11350–11363 . 20698702 . 2932487 .