Small nucleolar RNA snR60/Z15/Z230/Z193/J17 explained

Small nucleolar RNA snR60/Z15/Z230/Z193/J17
Symbol:snosnR60_Z15
Altsymbols:snoZ193
Rfam:RF00309
Rna Type:Gene
snRNA; snoRNA; CD-box
Tax Domain:Eukaryota

In molecular biology, snoRNA snR60 is a non-coding RNA (ncRNA) molecule which functions in the modification of other small nuclear RNAs (snRNAs). This type of modifying RNA is usually located in the nucleolus of the eukaryotic cell which is a major site of snRNA biogenesis. It is known as a small nucleolar RNA (snoRNA) and also often referred to as a guide RNA.snoRNA snR60 belongs to the C/D box class of snoRNAs which contain the conserved sequence motifs known as the C box (UGAUGA) and the D box (CUGA). Most of the members of the box C/D family function in directing site-specific 2'-O-methylation of substrate RNAs.[1] snoRNA snR60 was initially discovered using a computational screen of the Saccharomyces cerevisiae genome,[2] subsequent experimental screens discovered plant homologues Z15, Z230, Z193 and J17[3] and human U80/SNORD80.

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Notes and References

  1. Galardi S, Fatica A, Bachi A, Scaloni A, Presutti C, Bozzoni I . Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro . Molecular and Cellular Biology . 22 . 19 . 6663–8 . October 2002 . 12215523 . 134041 . 10.1128/MCB.22.19.6663-6668.2002 .
  2. Lowe TM, Eddy SR . A computational screen for methylation guide snoRNAs in yeast . Science . 283 . 5405 . 1168–71 . February 1999 . 10024243 . 10.1126/science.283.5405.1168 . 1999Sci...283.1168L .
  3. Chen CL, Liang D, Zhou H, Zhuo M, Chen YQ, Qu LH . The high diversity of snoRNAs in plants: identification and comparative study of 120 snoRNA genes from Oryza sativa . Nucleic Acids Research . 31 . 10 . 2601–13 . May 2003 . 12736310 . 156054 . 10.1093/nar/gkg373 .