SUMO2 explained
Small ubiquitin-related modifier 2 is a protein that in humans is encoded by the SUMO2 gene.[1]
Function
This gene encodes a protein that is a member of the SUMO (small ubiquitin-like modifier) protein family. It is a ubiquitin-like protein and functions in a manner similar to ubiquitin in that it is bound to target proteins as part of a post-translational modification system. However, unlike ubiquitin, which is primarily associated with targeting proteins for proteasomal degradation, SUMO2 is involved in a variety of cellular processes, such as nuclear transport, transcriptional regulation, apoptosis, and protein stability. It is not active until the last two amino acids of the carboxy-terminus have been cleaved off. Numerous pseudogenes have been reported for this gene. Alternate transcriptional splice variants encoding different isoforms have been characterized.[2]
Interactions
SUMO2 has been shown to interact with TRIM63[3] and CFAP298.[4]
Clinical significance
Deep hypothermia protects the brain from ischemic injury, which is why it's employed for major cardiovascular procedures that necessitate cardiopulmonary bypass and a period of circulatory arrest. With an experiment [5] conducted to moderate hypothermia, small ubiquitin-like modifier (SUMO1-3) conjugation was significantly activated in the brain. The effects of hypothermia on SUMO conjugation were evaluated in this experiment using Western blot and immunohistochemistry in animals that were either normothermic (37 °C) or deep to moderate (18 °C, 24 °C, 30 °C) hypothermic cardiopulmonary bypass. In these cells, even 30 °C hypothermia was enough to significantly boost SUMO2/3-conjugated protein levels and nucleus accumulation. Deep hypothermia caused the SUMO-conjugating enzyme Ubc9 to translocate to the nucleus, implying that the increase in nuclear levels of SUMO2/3-conjugated proteins seen in hypothermic animals' brains is an active process. Deep hypothermia caused only a small increase in the amounts of SUMO2/3-conjugated proteins in primary neuronal cells. This shows that neurons in vivo have a greater capacity to activate this endogenous possibly neuroprotective mechanism when exposed to hypothermia than neurons in vitro. Identifying proteins that are SUMO2/3 conjugated during hypothermia could aid in the development of new preventive and therapeutic therapies to make neurons more resistant to a transient blood supply interruption.
References
Further reading
- Maruyama K, Sugano S . Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides . Gene . 138 . 1–2 . 171–4 . Jan 1994 . 8125298 . 10.1016/0378-1119(94)90802-8 .
- Lapenta V, Chiurazzi P, van der Spek P, Pizzuti A, Hanaoka F, Brahe C . SMT3A, a human homologue of the S. cerevisiae SMT3 gene, maps to chromosome 21qter and defines a novel gene family . Genomics . 40 . 2 . 362–6 . Mar 1997 . 9119407 . 10.1006/geno.1996.4556 .
- Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S . Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library . Gene . 200 . 1–2 . 149–56 . Oct 1997 . 9373149 . 10.1016/S0378-1119(97)00411-3 .
- Kamitani T, Nguyen HP, Kito K, Fukuda-Kamitani T, Yeh ET . Covalent modification of PML by the sentrin family of ubiquitin-like proteins . The Journal of Biological Chemistry . 273 . 6 . 3117–20 . Feb 1998 . 9452416 . 10.1074/jbc.273.6.3117 . free .
- Kamitani T, Kito K, Nguyen HP, Fukuda-Kamitani T, Yeh ET . Characterization of a second member of the sentrin family of ubiquitin-like proteins . The Journal of Biological Chemistry . 273 . 18 . 11349–53 . May 1998 . 9556629 . 10.1074/jbc.273.18.11349 . free .
- Saitoh H, Hinchey J . Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3 . The Journal of Biological Chemistry . 275 . 9 . 6252–8 . Mar 2000 . 10692421 . 10.1074/jbc.275.9.6252 . free .
- Nishida T, Tanaka H, Yasuda H . A novel mammalian Smt3-specific isopeptidase 1 (SMT3IP1) localized in the nucleolus at interphase . European Journal of Biochemistry . 267 . 21 . 6423–7 . Nov 2000 . 11029585 . 10.1046/j.1432-1327.2000.01729.x . free .
- Dai KS, Liew CC . A novel human striated muscle RING zinc finger protein, SMRZ, interacts with SMT3b via its RING domain . The Journal of Biological Chemistry . 276 . 26 . 23992–9 . Jun 2001 . 11283016 . 10.1074/jbc.M011208200 . free .
- Tatham MH, Jaffray E, Vaughan OA, Desterro JM, Botting CH, Naismith JH, Hay RT . Polymeric chains of SUMO-2 and SUMO-3 are conjugated to protein substrates by SAE1/SAE2 and Ubc9 . The Journal of Biological Chemistry . 276 . 38 . 35368–74 . Sep 2001 . 11451954 . 10.1074/jbc.M104214200 . free .
- Nishida T, Kaneko F, Kitagawa M, Yasuda H . Characterization of a novel mammalian SUMO-1/Smt3-specific isopeptidase, a homologue of rat axam, which is an axin-binding protein promoting beta-catenin degradation . The Journal of Biological Chemistry . 276 . 42 . 39060–6 . Oct 2001 . 11489887 . 10.1074/jbc.M103955200 . free .
- Hardeland U, Steinacher R, Jiricny J, Schär P . Modification of the human thymine-DNA glycosylase by ubiquitin-like proteins facilitates enzymatic turnover . The EMBO Journal . 21 . 6 . 1456–64 . Mar 2002 . 11889051 . 125358 . 10.1093/emboj/21.6.1456 .
- Kim J, Cantwell CA, Johnson PF, Pfarr CM, Williams SC . Transcriptional activity of CCAAT/enhancer-binding proteins is controlled by a conserved inhibitory domain that is a target for sumoylation . The Journal of Biological Chemistry . 277 . 41 . 38037–44 . Oct 2002 . 12161447 . 10.1074/jbc.M207235200 . free .
- Su HL, Li SS . Molecular features of human ubiquitin-like SUMO genes and their encoded proteins . Gene . 296 . 1–2 . 65–73 . Aug 2002 . 12383504 . 10.1016/S0378-1119(02)00843-0 .
- Petrie K, Guidez F, Howell L, Healy L, Waxman S, Greaves M, Zelent A . The histone deacetylase 9 gene encodes multiple protein isoforms . The Journal of Biological Chemistry . 278 . 18 . 16059–72 . May 2003 . 12590135 . 10.1074/jbc.M212935200 . free .
- Hietakangas V, Ahlskog JK, Jakobsson AM, Hellesuo M, Sahlberg NM, Holmberg CI, Mikhailov A, Palvimo JJ, Pirkkala L, Sistonen L . Phosphorylation of serine 303 is a prerequisite for the stress-inducible SUMO modification of heat shock factor 1 . Molecular and Cellular Biology . 23 . 8 . 2953–68 . Apr 2003 . 12665592 . 152542 . 10.1128/MCB.23.8.2953-2968.2003 .
- Eaton EM, Sealy L . Modification of CCAAT/enhancer-binding protein-beta by the small ubiquitin-like modifier (SUMO) family members, SUMO-2 and SUMO-3 . The Journal of Biological Chemistry . 278 . 35 . 33416–21 . Aug 2003 . 12810706 . 10.1074/jbc.M305680200 . free .
- Tatham MH, Kim S, Yu B, Jaffray E, Song J, Zheng J, Rodriguez MS, Hay RT, Chen Y . Role of an N-terminal site of Ubc9 in SUMO-1, -2, and -3 binding and conjugation . Biochemistry . 42 . 33 . 9959–69 . Aug 2003 . 12924945 . 10.1021/bi0345283 .
- Chung TL, Hsiao HH, Yeh YY, Shia HL, Chen YL, Liang PH, Wang AH, Khoo KH, Shoei-Lung Li S . In vitro modification of human centromere protein CENP-C fragments by small ubiquitin-like modifier (SUMO) protein: definitive identification of the modification sites by tandem mass spectrometry analysis of the isopeptides . The Journal of Biological Chemistry . 279 . 38 . 39653–62 . Sep 2004 . 15272016 . 10.1074/jbc.M405637200 . free .
Notes and References
- Mannen H, Tseng HM, Cho CL, Li SS . Cloning and expression of human homolog HSMT3 to yeast SMT3 suppressor of MIF2 mutations in a centromere protein gene . Biochemical and Biophysical Research Communications . 222 . 1 . 178–80 . May 1996 . 8630065 . 10.1006/bbrc.1996.0717 .
- Web site: Entrez Gene: SUMO2 SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae).
- Dai KS, Liew CC . A novel human striated muscle RING zinc finger protein, SMRZ, interacts with SMT3b via its RING domain . The Journal of Biological Chemistry . 276 . 26 . 23992–9 . Jun 2001 . 11283016 . 10.1074/jbc.M011208200 . free .
- Golebiowski F, Matic I, Tatham MH, Cole C, Yin Y, Nakamura A, Cox J, Barton GJ, Mann M, Hay RT . System-wide changes to SUMO modifications in response to heat shock . Science Signaling . 2 . 72 . ra24 . 2009 . 19471022 . 10.1126/scisignal.2000282 . 33450256 .
- Wang . Liangli . Ma . Qing . Yang . Wei . Mackensen . G. Burkhard . Paschen . Wulf . November 2012 . Moderate hypothermia induces marked increase in levels and nuclear accumulation of SUMO2/3-conjugated proteins in neurons . Journal of Neurochemistry . en . 123 . 3 . 349–359 . 10.1111/j.1471-4159.2012.07916.x . 3466336 . 22891650.