Resonance Raman spectroscopy explained

Resonance Raman spectroscopy (RR spectroscopy or RRS) is a variant of Raman spectroscopy in which the incident photon energy is close in energy to an electronic transition of a compound or material under examination.^[1] This similarity in energy (resonance) leads to greatly increased intensity of the Raman scattering of certain vibrational modes, compared to ordinary Raman spectroscopy.

Resonance Raman spectroscopy has much greater sensitivity than non-resonance Raman spectroscopy, allowing for the analysis of compounds with inherently weak Raman scattering intensities, or at very low concentrations.^{[2] [3]} It also selectively enhances only certain molecular vibrations (those of the chemical group undergoing the electronic transition), which simplifies spectra. For large molecules such as proteins, this selectivity helps to identify vibrational modes of specific parts of the molecule or protein, such as the heme unit within myoglobin.^[4] Resonance Raman spectroscopy has been used in the characterization of inorganic compounds and complexes,^[5] proteins,^{[6] [7]} nucleic acids,^[8] pigments, and in archaeology and art history.

Theory

In Raman scattering, photons collide with a sample and are scattered with a difference in energy: The scattered photons may be higher or lower in energy (have a shorter or longer wavelength) than the incident photons. This difference in energy is caused by excitation of the sample to a higher or lower vibrational energy level: if the sample was initially in an excited vibrational state, the scattered photon may be higher in energy than the incident photon (anti-Stokes Raman scattering). Otherwise, the scattered photon has a lower module of energy than the incoming photon (Stokes Raman scattering). Among the two phenomena, Stokes shift and anti-Stokes shift, the former is the most likely to occur. As a consequence, the relative intensity of Raman spectra acquired in Stokes mode is more intense than the other. For most materials, Raman scattering is extremely weak compared to Rayleigh scattering, in which light is scattered without loss of energy.^[9] Raman-scattered light, which contains information about vibrational transitions, is therefore difficult to observe for many substances.

Resonance Raman spectroscopy takes advantage of an increase in the intensity of Raman scattering when the incident photons match the energy of an electronic transition. If the energy of the photon striking the sample is equal or close to that of an electronic transition in the sample, certain Raman-active vibrational modes - those producing nuclear displacement in the same direction as the electronic transition^[10] - will exhibit greatly enhanced scattering, up to 10⁶-fold compared to nonresonance Raman. For totally symmetric modes, this increased scattering intensity results from so-called A-term or Franck-Condon scattering, due to the nonzero Franck-Condon overlaps between ground and excited states. Nontotally symmetric modes may also be enhanced by B-term or Herzberg-Teller scattering, if the symmetry of the mode is contained in the direct product of the two electronic state symmetries.^[11] Resonance enhancement is most apparent in the case of π-π* transitions and least for metal centered (d–d) transitions. Like ordinary Raman spectroscopy, RRS observes vibrational transitions producing a nonzero change in the polarizability of the molecule or material being studied.

Resonance Raman scattering differs from fluorescence in that it occurs without vibrational relaxation during the lifetime of the excited electronic state. It thus exhibits much narrower line widths than fluorescence. However, fluorescence and resonance Raman scattering co-occur in many materials, and interference from fluorescence may complicate the collection of resonance Raman spectra.

Variants

Typically, resonance Raman spectroscopy is performed in the same manner as ordinary Raman spectroscopy, using a single laser light source to excite the sample. The difference is the choice of the laser wavelength, which must be selected to match the energy of an electronic transition in the sample. A tunable laser is thus often used for resonance Raman spectroscopy, since a single laser can be used to generate many possible excitation wavelengths to match different samples. By using multiple lasers, pulsed lasers, and/or certain sample preparation techniques, a range of more sophisticated variants of RRS can be performed, including:

• Time-resolved resonance Raman spectroscopy: By using pulsed lasers with a controllable delay between pulses, resonance Raman spectroscopy can be used to monitor changes in the sample over time, following a laser-induced photochemical change or temperature increase.^[12] This method has been used to examine the dynamics of excited electronic states,^[13] binding of oxygen or other gases to heme-containing proteins,^[14] and protein dynamics.^[15]
• Resonance hyper-Raman spectroscopy: Excitation of the sample occurs by two-photon absorption, rather than by absorption of a single photon. This arrangement allows for excitation of modes that are forbidden in ordinary resonance Raman spectroscopy, with intensity enhancement due to resonance, and also simplifies collection of scattered light. It is especially useful for molecules that are both polar and polarizable.^[16]
• Surface-enhanced resonance Raman spectroscopy: A hybrid of RRS and surface-enhanced Raman scattering. The sample is applied to conducting nanoparticles and a laser matching the surface plasmon resonance of the nanoparticles is used for excitation. If the wavelength of the surface plasmon matches that of an electronic transition in the sample, the Raman scattering will be greatly enhanced compared to ordinary RRS.^[17]
• Resonance Raman microscopy: A microscope is used to focus the excitation laser onto a particular point in the sample, and spectra are collected for many such points. The Raman intensity at different points can then be assembled into a microscopic image of the sample. By appropriate choice of excitation wavelength, a microscopic map of the distribution only of a component of interest can be made.^[18]

Applications

Because of its selectivity and sensitivity, resonance Raman spectroscopy is typically used to study molecular vibrations in compounds that would have very weak and/or complex Raman spectra in the absence of resonance enhancement. Like ordinary Raman spectroscopy, resonance Raman is compatible with samples in water, which has a very weak scattering intensity and little contribution to spectra. However, the need for an excitation laser with a wavelength matching that of an electronic transition in the analyte of interest somewhat limits the applicability of the method.

Pigments and Dyes

Dyes and pigments, all of which exhibit electronic transitions in the visible part of the electromagnetic spectrum, were among the first substances to be studied by resonance Raman spectroscopy. Resonance Raman spectra of beta-carotene and lycopene in intact plant samples were reported in 1970. Since then, the method has been used to noninvasively measure levels of these nutrients in human skin.^[19] The resonance Raman spectra of other polyene pigments, such as spheroidene and retinal, have been used to identify differences in chromophore conformation in photoactive proteins.^{[20] [21]} Resonance Raman spectroscopy has been used in archaeology to identify dyes and pigments in cultural artifacts, and the ability of RRS to distinguish different modern inks and dyes has found application in forensic science.

Proteins

Proteins have been widely examined by resonance Raman spectroscopy. Protein-bound cofactors that absorb in the visible wavelength range, such as heme, flavins, or transition metal complexes, can be examined by RRS with minimal spectral overlap from the rest of the molecule.^[22] This method has been used to examine gas binding in hemeproteins^[23] and the catalytic cycle of various enzymes.^[24] Using ultraviolet laser excitation, it is possible to selectively excite the sidechains of aromatic amino acids (phenylalanine, tyrosine, and tryptophan) to deduce the local environment and hydrogen-bonding interactions by these residues.^[25] With shorter-wavelength ("deep") ultraviolet excitation, it is also possible to excite the peptide bonds of a protein in order to examine secondary structure. Protein folding and denaturation have been examined using deep-UV resonance Raman spectroscopy of the polypeptide backbone, with excitation wavelengths shorter than 200 nm.

Nucleic acids and viruses

Resonance Raman spectroscopy with ultraviolet excitation can be used to examine the chemistry, structure, and intermolecular interactions of nucleic acids, specifically the bases. Interactions between nucleic acids and DNA-binding compounds such as drugs can be examined by selectively exciting either the nucleobases or the drug itself. The resonance Raman spectra of DNA can be used to identify bacterial DNA in living cells, and to quantitate DNA under different culture conditions, and even to distinguish different bacterial species. Viruses have also been studied using UV resonance Raman spectroscopy; the method has the capability to separately interrogate the structure of the nucleic acid or capsid protein components of the virus, through the choice of the appropriate excitation wavelength.^[26]

Nanomaterials

Resonance Raman spectroscopy has also been used to characterize the structure and photophysical properties of nanoparticles. Using lasers tuned to the visible and near-infrared electronic transitions of carbon nanotubes, it is possible to enhance structure-sensitive vibrational bands of the nanotubes. Nanowires of inorganic semiconductor materials including gallium phosphide and carbon-encapsulated mercury telluride have also been shown to exhibit resonance Raman spectra with visible excitation light.^{[27] [28]}

See also

• Scattering
• Rayleigh scattering
• X-ray Raman spectroscopy
• Coherent anti-Stokes Raman spectroscopy
• Tip-enhanced Raman spectroscopy
• Vibronic spectroscopy
• Depolarization ratio

Further reading

• Book: Long, Derek A . The Raman Effect: A Unified Treatment of the Theory of Raman Scattering by Molecules . Wiley . 2002 . 978-0471490289 .
• Book: Que . Lawrence Jr. . Physical Methods in Bioinorganic Chemistry: Spectroscopy and Magnetism . Sausalito, CA . University Science Books . 2000 . 978-1-891389-02-3 . 59–120 .
• Raman . C.V. . Krishnan . K.S. . A Change of Wave-Length in Light Scattering . Nature . 121 . 3051 . 619 . 1928 . 10.1038/121619b0 . 1928Natur.121..619R . free .
• Raman . C.V. . Krishnan . K.S. . A New Type of Secondary Radiation . Nature . 121 . 3048 . 501–502 . 1928 . 10.1038/121501c0 . 1928Natur.121..501R . 4128161 .
• Book: Skoog . Douglas A. . Holler . James F. . Nieman . Timothy A. . Principles of Instrumental Analysis . 5th . Saunders . 1998 . 978-0-03-002078-0 . 429–443.
• Landsberg . G.S . Mandelshtam . L.I. . Novoye yavlenie pri rasseyanii sveta. (New phenomenon in light scattering) . Zhurnal Russkogo Fiziko-khimicheskogo Obschestva, Chast Fizicheskaya (Journal of Russian Physico-Chemical Society, Physics Division . 60–4 . 1928 .
• R.S. . Chao . R.K. . Khanna . E.R. . Lippincott . Theoretical and experimental resonance Raman intensities for the manganate ion . 1975 . 10.1002/jrs.1250030203 . Journal of Raman Spectroscopy . 3 . 2–3 . 121–131. 1975JRSp....3..121C .

External links

• https://www.spectroscopyonline.com/view/exploring-resonance-raman-spectroscopy
• http://chemwiki.ucdavis.edu/Physical_Chemistry/Spectroscopy/Vibrational_Spectroscopy/Raman_Spectroscopy/Raman%3A_Interpretation
• http://www.horiba.com/us/en/scientific/products/Raman-spectroscopy/Raman-academy/Raman-faqs/what-is-polarised-Raman-spectroscopy/
• Web site: A.M. . Kelley . Resonance hyper-Raman spectroscopy . University of California, Merced .

Notes and References

1. Strommen. Dennis P.. Nakamoto. Kazuo. Resonance raman spectroscopy. Journal of Chemical Education. 54. 8. 1977. 474. 0021-9584. 10.1021/ed054p474. 1977JChEd..54..474S.
2. Book: Drago, R.S. . Physical Methods in Chemistry . Saunders . 1977 . 152 .
3. Morris. Michael D.. Wallan. David J.. Resonance raman spectroscopy: Current applications and prospects. Analytical Chemistry. 51. 2. 1979. 182A–192A. 0003-2700. 10.1021/ac50038a001.
4. Hu. Songzhou. Smith. Kevin M.. Spiro. Thomas G.. Assignment of Protoheme Resonance Raman Spectrum by Heme Labeling in Myoglobin. Journal of the American Chemical Society. January 1996. 118. 50. 12638–46. 10.1021/ja962239e.
5. Clark. Robin J.H.. Dines. Trevor J.. Resonance Raman spectroscopy, and its application to inorganic chemistry. Angewandte Chemie International Edition . February 1986. 25. 2. 131–158. 0570-0833. 10.1002/anie.198601311.
6. Book: Austin. J.C.. Rodgers. K.R.. Spiro. T.G.. Protein Structure from ultraviolet resonance Raman spectroscopy. Methods in Enzymology. 226. 1993. 374–396. 10.1016/0076-6879(93)26017-4. 8277873 .
7. Book: Spiro. T.G.. Czernuszewicz. R.S.. Resonance Raman spectroscopy of metalloproteins. Methods in Enzymology. 246. 1995. 416–460. 10.1016/0076-6879(95)46020-9 . 7752933 . 0076-6879.
8. Efremov. Evtem V.. Ariese. Freek. Gooijer. Cees. Achievements in resonance Raman spectroscopy: Review of a technique with a distinct analytical chemistry potential. Analytica Chimica Acta. 606. 2008. 2 . 119–134. 10.1016/j.aca.2007.11.006. 18082644 .
9. Orlando . Andrea . Franceschini. Filippo . Muscas . Cristian . Pidkova . Solomiya . Bartoli . Mattia . Rovere . Massimo . Tagliaferro . Alberto . 2021 . A comprehensive review on Raman spectroscopy applications . Chemosensors . 9. 9 . 262 . 10.3390/chemosensors9090262 . free .
10. Hirakawa . Akiko Y. . Tsuboi . Masamichi . 1975 . Molecular geometry in an excited electronic state and a preresonance Raman effect . Science . 188. 4186 . 359–361 . 10.1126/science.188.4186.359 . 1739341 . 17807877 . 7686714 .
11. Spiro . T.G. . Stein . Paul . 1977 . Resonance effects in vibrational scattering from complex molecules . Annual Review of Physical Chemistry . 28 . 501–521 . 10.1146/annurev.pc.28.100177.002441.
12. Buhrke. David. Hildebrandt. Peter. Probing structure and reaction dynamics of proteins using time-resolved Raman spectroscopy. Chemical Reviews. 120. 7. 2020. 3577–3630. 0009-2665. 10.1021/acs.chemrev.9b00429. 31814387 . 208954659 .
13. Sahoo. Sangram Keshari. Umapathy. Siva. Parker. Anthony W.. Time-resolved resonance Raman spectroscopy: Exploring reactive intermediates. Applied Spectroscopy. 65. 10. 2011. 1087–1115. 0003-7028. 10.1366/11-06406. 21986070 . 20448809 .
14. Spiro. Thomas G.. Resonance Raman spectroscopy as a probe of heme protein structure and dynamics. Advances in Protein Chemistry. 37. 1985. 111–159. 0065-3233. 10.1016/S0065-3233(08)60064-9. 2998161 . 9780120342372 .
15. Mizutani. Yasuhisa. Time-resolved resonance Raman spectroscopy and application to studies on ultrafast protein dynamics. Bulletin of the Chemical Society of Japan. 90. 12. 2017. 1344–1371. 0009-2673. 10.1246/bcsj.20170218. free.
16. Kelley. Anne Myers. Hyper-Raman Scattering by Molecular Vibrations. Annual Review of Physical Chemistry. 61. 1. 2010. 41–61. 0066-426X. 10.1146/annurev.physchem.012809.103347. 20055673.
17. Smith. W.E.. Practical understanding and use of surface-enhanced Raman scattering/surface-enhanced resonance Raman scattering in chemical and biological analysis. Chemical Society Reviews. 37. 2008. 5 . 955–964. 1460-4744. 10.1039/b708841h. 18443681 .
18. Vogt. Frederick G.. Strohmeier. Mark. Confocal UV and resonance Raman microscopic imaging of pharmaceutical products. Molecular Pharmaceutics. 10. 11. 2013. 4216–4228. 1543-8384. 10.1021/mp400314s. 24050305 .
19. Scarmo. Stephanie . Cartmel . Brenda . Lin . Haiqun . Leffell . David J. . Ermakov . Igor V. . Gellermann . Werner . Bernstein . Paul S. . Mayne . Susan T.. 2013. Single v. multiple measures of skin carotenoids by resonance Raman spectroscopy as a biomarker of usual carotenoid status. British Journal of Nutrition. 110. 5. 911–917. 10.1017/S000711451200582X. 23351238 . 3696054 .
20. Senak. L.. Ju. Z.M.. Noy. N.. Callender. R.. Manor. D.. The interactions between cellular retinol-binding protein (CRBP-I) and retinal: A vibrational spectroscopic study. Biospectroscopy. 3. 2. 1997. 131–142. 1075-4261. 10.1002/(SICI)1520-6343(1997)3:2<131::AID-BSPY6>3.0.CO;2-A .
21. Mathies. Guinevere. van Hemert. Marc C.. Gast. Peter. Gupta. Karthick B. Sai Sankar. Frank. Harry A.. Lugtenburg. Johan. Groenen. Edgar J.J.. Configuration of spheroidene in the photosynthetic reaction center of Rhodobacter spheroides: A comparison of wild-type and reconstituted R26. Journal of Physical Chemistry A. 115. 34. 2011. 9552–9556. 1089-5639. 10.1021/jp112413d. 21604722 . 1887/3570972 . free.
22. Stanley. R.J.. Advances in flavin and flavoprotein optical spectroscopy. Antioxidants & Redox Signaling. 3. 5. 2001. 847–866. 1523-0864. 10.1089/15230860152665028. 11761332 .
23. Hirota. S.. Ogura. T.. Appelman. E.H.. Shinzawaitoh. K.. Yoshikawa. S.. Kitagawa. T.. Observation of a new oxygen-isotope-sensitive Raman band for oxyhemoproteins and its implication in heme pocket structures. Journal of the American Chemical Society. 116. 23. 1994. 10564–10570. 0002-7863. 10.1021/ja00102a025.
24. Mukherjee. Manjistha. Dey. Abhishek. Rejigging Electron and Proton Transfer to Transition between Dioxygenase, Monooxygenase, Peroxygenase, and Oxygen Reduction Activity: Insights from Bioinspired Constructs of Heme Enzymes. JACS Au. 1. 9. 2021. 1296–1311. 2691-3704. 10.1021/jacsau.1c00100. 34604840 . 8479764 .
25. Oladepo. Sulayman A.. Xiong. Kan. Hong. Zhenmin. Asher. Sanford A.. Handen. Joseph. Lednev. Igor K.. UV resonance Raman investigations of peptide and protein structure and dynamics. Chemical Reviews. 112. 2012. 5 . 2604–2628. 10.1021/cr200198a. 22335827 . 3349015 .
26. Thomas. George J.. Raman spectroscopy of protein and nucleic acid assemblies. Annual Review of Biophysics and Biomolecular Structure . 28. 1999. 1–27. 10410793. 1056-8700. 10.1146/annurev.biophys.28.1.1.
27. 10.1021/nn5023632 . 25163005 . Raman Spectroscopy of Optical Transitions and Vibrational Energies of ~1 nm HgTe Extreme Nanowires within Single Walled Carbon Nanotubes . ACS Nano . 8. 9 . 9044–52 . 2014 . Spencer . Joseph . Nesbitt . John . Trewhitt . Harrison . Kashtiban . Reza . Bell . Gavin . Ivanov . Victor . Faulques . Eric . Smith . David.
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