Patricia Babbitt Explained

Patricia Babbitt
Birth Name:Patricia Clement Babbitt
Fields:Bioinformatics
Computational biology
Workplaces:University of California, San Francisco
Education:University of California, San Francisco (PhD)
Thesis Title:Sequence determination, expression, and site-directed mutagenesis of creatine kinase
Thesis Url:https://search.proquest.com/docview/303714424
Thesis Year:1988
Doctoral Advisor:George L. Kenyon
Irwin Kuntz[1]
Awards:ISCB Fellow (2018)
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Patricia Clement Babbitt is a Professor and Principal Investigator (PI) in the school of pharmacy at the University of California, San Francisco (UCSF).[2] [3] [4] [5]

Education

Patricia Babbitt earned a PhD in pharmaceutical chemistry in 1988 from the University of California, San Francisco[1] [2] for research supervised by George L. Kenyon and Irwin Kuntz.[1]

Career and research

Babbitt serves as the director of the UCSF bioinformatics and medical informatics graduate program. She also serves on the advisory boards for the UniProt, InterPro[6] and MetaCyc databases, the Howard Hughes Medical Institute (HHMI) scientific review board, and as a deputy editor for PLOS Computational Biology.[7] Her research interests include bioinformatics and computational biology.

Awards and honors

Babbitt was elected a Fellow of the International Society for Computational Biology (ISCB) in 2018 for “outstanding contributions to the fields of computational biology and bioinformatics”.[8]

Notes and References

  1. PhD. University of California, San Francisco. Sequence determination, expression, and site-directed mutagenesis of creatine kinase. Patricia Clement. Babbit. 1988. 19528718. .
  2. Web site: Patricia Babbitt UCSF Profile. profiles.ucsf.edu.
  3. Web site: Babbitt Lab Website. babbittlab.ucsf.edu. 2018-03-14. 2017-12-19. https://web.archive.org/web/20171219211041/http://babbittlab.ucsf.edu/. dead.
  4. Gerlt. John A.. Babbitt. Patricia C.. Divergent Evolution of Enzymatic Function: Mechanistically Diverse Superfamilies and Functionally Distinct Suprafamilies. Annual Review of Biochemistry. 70. 1. 2001. 209–246. 0066-4154. 10.1146/annurev.biochem.70.1.209. 11395407.
  5. Radivojac. Predrag. Clark. Wyatt T. Oron. Tal Ronnen. Schnoes. Alexandra M. Wittkop. Tobias. Sokolov. Artem. Graim. Kiley. Funk. Christopher. Verspoor. Karin. Ben-Hur. Asa. Pandey. Gaurav. Yunes. Jeffrey M. Talwalkar. Ameet S. Repo. Susanna. Souza. Michael L. Piovesan. Damiano. Casadio. Rita. Wang. Zheng. Cheng. Jianlin. Fang. Hai. Gough. Julian. Koskinen. Patrik. Törönen. Petri. Nokso-Koivisto. Jussi. Holm. Liisa. Cozzetto. Domenico. Buchan. Daniel W A. Bryson. Kevin. Jones. David T. Limaye. Bhakti. Inamdar. Harshal. Datta. Avik. Manjari. Sunitha K. Joshi. Rajendra. Chitale. Meghana. Kihara. Daisuke. Lisewski. Andreas M. Erdin. Serkan. Venner. Eric. Lichtarge. Olivier. Rentzsch. Robert. Yang. H. Romero. Alfonso E. Bhat. Prajwal. Paccanaro. Alberto. Hamp. Tobias. Kaßner. Rebecca. Seemayer. Stefan. Vicedo. Esmeralda. Schaefer. Christian. Achten. Dominik. Auer. Florian. Boehm. Ariane. Braun. Tatjana. Hecht. Maximilian. Heron. Mark. Hönigschmid. Peter. Hopf. Thomas A. Kaufmann. Stefanie. Kiening. Michael. Krompass. Denis. Landerer. Cedric. Mahlich. Yannick. Roos. Manfred. Björne. Jari. Salakoski. Tapio. Wong. Andrew. Shatkay. Hagit. Gatzmann. Fanny. Sommer. Ingolf. Wass. Mark N. Sternberg. Michael J E. Škunca. Nives. Supek. Fran. Bošnjak. Matko. Panov. Panče. Džeroski. Sašo. Šmuc. Tomislav. Kourmpetis. Yiannis A I. van Dijk. Aalt D J. Braak. Cajo J F ter. Zhou. Yuanpeng. Gong. Qingtian. Dong. Xinran. Tian. Weidong. Falda. Marco. Fontana. Paolo. Lavezzo. Enrico. Di Camillo. Barbara. Toppo. Stefano. Lan. Liang. Djuric. Nemanja. Guo. Yuhong. Vucetic. Slobodan. Bairoch. Amos. Linial. Michal. Babbitt. Patricia C. Brenner. Steven E. Orengo. Christine. Rost. Burkhard. Mooney. Sean D. Friedberg. Iddo. 13. A large-scale evaluation of computational protein function prediction. Nature Methods. 10. 3. 2013. 221–227. 1548-7091. 10.1038/nmeth.2340. 23353650. 3584181 .
  6. Finn. Robert D.. Attwood. Teresa K.. Babbitt. Patricia C.. Bateman. Alex. Bork. Peer. Bridge. Alan J.. Chang. Hsin-Yu. Dosztányi. Zsuzsanna. El-Gebali. Sara. Fraser. Matthew. Gough. Julian. Haft. David. Holliday. Gemma L.. Huang. Hongzhan. Huang. Xiaosong. Letunic. Ivica. Lopez. Rodrigo. Lu. Shennan. Marchler-Bauer. Aron. Mi. Huaiyu. Mistry. Jaina. Natale. Darren A.. Necci. Marco. Nuka. Gift. Orengo. Christine A.. Park. Youngmi. Pesseat. Sebastien. Piovesan. Damiano. Potter. Simon C.. Rawlings. Neil D.. Redaschi. Nicole. Richardson. Lorna. Rivoire. Catherine. Sangrador-Vegas. Amaia. Sigrist. Christian. Sillitoe. Ian. Smithers. Ben. Squizzato. Silvano. Sutton. Granger. Thanki. Narmada. Thomas. Paul D. Tosatto. Silvio C. E.. Wu. Cathy H.. Xenarios. Ioannis. Yeh. Lai-Su. Young. Siew-Yit. Mitchell. Alex L.. 27899635 . 5210578 . InterPro in 2017—beyond protein family and domain annotations. Nucleic Acids Research. 45. D1. 2017. D190–D199. 0305-1048. 10.1093/nar/gkw1107.
  7. Web site: CMNS Distinguished Woman Faculty Lecture . umd.edu. University of Maryland.
  8. Web site: ISCB Fellows. iscb.org. Anon. 2018. International Society for Computational Biology. 2018-03-14. https://web.archive.org/web/20170320114530/https://www.iscb.org/iscb-fellows. 2017-03-20. dead.

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