Phosphotyrosine-binding domain explained

Symbol:IRS
PTB domain (IRS-1 type)
Pfam:PF02174
Interpro:IPR002404
Smart:PTBI
Scop:1cli
Cdd:cd01204

In molecular biology, phosphotyrosine-binding domains are protein domains which bind to phosphotyrosine.

The phosphotyrosine-binding domain (PTB, also phosphotyrosine-interaction or PI domain) in the protein tensin tends to be found at the C-terminus. Tensin is a multi-domain protein that binds to actin filaments and functions as a focal-adhesion molecule (focal adhesions are regions of plasma membrane through which cells attach to the extracellular matrix). Human tensin has actin-binding sites, an SH2 domain and a region similar to the tumour suppressor PTEN.[1] The PTB domain interacts with the cytoplasmic tails of beta integrin by binding to an NPXY motif.[2]

The phosphotyrosine-binding domain of insulin receptor substrate-1 is not related to the phosphotyrosine-binding domain of tensin.Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain and a phosphotyrosine binding (PTB) domain. The PTB domains facilitate interaction with the activated tyrosine-phosphorylated insulin receptor. The PTB domain is situated towards the N terminus. Two arginines in this domain are responsible for hydrogen bonding phosphotyrosine residues on an Ac-LYASSNPApY-NH2 peptide in the juxtamembrane region of the insulin receptor. Further interactions via "bridged" water molecules are coordinated by residues an Asn and a Ser residue.[3] The PTB domain has a compact, 7-stranded beta-sandwich structure, capped by a C-terminal helix. The substrate peptide fits into an L-shaped surface cleft formed from the C-terminal helix and strands 5 and 6.[4]

Human proteins containing these domains

APBA1

APBA2; APBA3; APPL1; EPS8; EPS8L1; EPS8L2; EPS8L3; TENC1; TNS; TNS1; TNS3; TNS4; DOK1; DOK2; DOK3; DOK4; DOK5; DOK6; DOK7; FRS2; FRS3; IRS1; IRS2; IRS4; NOS1AP; TLN1; TLN2

See also

Notes and References

  1. Chen H, Ishii A, Wong WK, Chen LB, Lo SH . Molecular characterization of human tensin . Biochem. J. . 351 . 2. 403–11 . October 2000 . 11023826 . 1221376 . 10.1042/0264-6021:3510403.
  2. Lo SH . Tensin . Int. J. Biochem. Cell Biol. . 36 . 1 . 31–4 . January 2004 . 14592531 . 10.1016/S1357-2725(03)00171-7.
  3. Eck MJ, Dhe-Paganon S, Trub T, Nolte RT, Shoelson SE . Structure of the IRS-1 PTB domain bound to the juxtamembrane region of the insulin receptor . Cell . 85 . 5 . 695–705 . May 1996 . 8646778 . 10.1016/S0092-8674(00)81236-2. 8896348 . free .
  4. Zhou MM, Huang B, Olejniczak ET, Meadows RP, Shuker SB, Miyazaki M, Trub T, Shoelson SE, Fesik SW . Structural basis for IL-4 receptor phosphopeptide recognition by the IRS-1 PTB domain . Nat. Struct. Biol. . 3 . 4 . 388–93 . April 1996 . 8599766 . 10.1038/nsb0496-388. 41440041 .