Oxford Nanopore Technologies Explained
Oxford Nanopore Technologies plc is a UK-based company which develops and sells nanopore sequencing products (including the portable DNA sequencer, MinION) for the direct, electronic analysis of single molecules.[2] [3]
History
The company was founded in 2005 as a spin-out from the University of Oxford by Hagan Bayley, Gordon Sanghera, and Spike Willcocks, with seed funding from the IP Group.[4] The company made an initial public offering on the London Stock Exchange on 30 September 2021, under the ticker ONT.[5]
In March 2016 the company announced a chemistry upgrade to its nanopore sequencing product 'R9', using a protein nanopore in collaboration with the laboratory of Han Remaut (VIB/Vrije Universiteit Brussel).[6] The company stated in a webcast that R9 is designed to improve error rates and yield.[7]
In July 2016, a MinION nanopore sequencer was included on the ninth NASA/SpaceX commercial cargo resupply services mission to the International Space Station.[8] The aim of the mission was to provide proof of concept for the MinION's functionality in a microgravity environment.[9] During the mission, ISS crew members successfully sequenced DNA from bacteria, bacteriophage and rodents from samples prepared on Earth.[10] Maintaining the MinION device as a research facility on the space station holds the potential to support a number of additional science investigations, any of which could have Earth based applications.[11]
Products
The main products of Oxford Nanopore are:
- MinION:[12] [13] [14] this harmonica-sized portable protein nanopore sequencing USB device has been commercially available since May 2015[15] after having been launched initially through an early access program, the MinION Access Program (MAP).[16]
- GridION X5: this desktop device has been commercially available since March 2017.[17] The device processes up to five MinION Flow Cells and enables generation of up to 100 Gb of data per run.[18]
- PromethION: this desktop, high throughput device will be available through an access program[19] that opened for registration in July 2015. The device contains channels for 144,000 nanopores (in comparison to MinION’s 512).[20]
- VolTRAX: this device is designed for automated sample preparation so that users do not need a laboratory or lab skills to run the device.[21] Registration for the early access program was opened in October 2016.[22]
- Metrichor: this spinout company from Oxford Nanopore was set up to provide end to end solutions for biological analyses, using nanopore sensing technologies.[23] [24]
- SmidgION: a mobile phone sequencer announced in May 2016, currently in development.[25]
These products are intended to be used for the analysis of DNA, RNA, proteins and small molecules with a range of applications in personalized medicine, crop science, and scientific research.[12] [26]
External links
Notes and References
- Web site: Annual Results for year ended 31 December 2023 . Oxford Nanopore Technologies. 4 September 2024.
- 10.1038/nbt0412-295. 22491260. Oxford Nanopore announcement sets sequencing sector abuzz. Nature Biotechnology. 30. 4. 295–6. 2012. Eisenstein . M. . 205267199.
- 25143291. 2014. Loman. N. J.. Poretools: A toolkit for analyzing nanopore sequence data. Bioinformatics. 30. 23. 3399–401. Quinlan. A. R.. 10.1093/bioinformatics/btu555 . 4296151.
- News: 2008-10-16 . DNA sequencing: The hole story . The Economist . London . 2014-10-19.
- Web site: London Stock Exchange welcomes Oxford Nanopore Technologies plc to the Main Market . 2021-10-11.
- Web site: VIB announces collaboration with Oxford Nanopore Technologies on new DNA sequencing nanopore . 2016-05-09 .
- Web site: No thanks, I've already got one . YouTube. 2016-05-09 .
- Web site: Next SpaceX Commercial Cargo Launch Now No Earlier Than July 18. Ramsey. Sarah. 2016-06-21. 2016-07-25.
- Web site: Sequencing DNA in Space - SpaceRef. spaceref.com. 2016-07-25.
- News: First DNA Sequencing in Space a Game Changer. Rainey. Kristine. 2016-08-29. NASA. 2016-10-17.
- McIntyre. Alexa B. R.. Rizzardi. Lindsay. Yu. Angela M.. Rosen. Gail L.. Alexander. Noah. Botkin. Douglas J.. John. Kristen K.. Castro-Wallace. Sarah L.. Burton. Aaron S.. 2015-12-10. Nanopore Sequencing in Microgravity. 10.1101/032342.
- 25187008. 2014. Mikheyev. A. S.. A first look at the Oxford Nanopore MinION sequencer. Molecular Ecology Resources. 14. 6. 1097–102. Tin. M. M. Y.. 10.1111/1755-0998.12324. 3674911.
- 10.1038/nature.2014.14724. Data from pocket-sized genome sequencer unveiled. Nature. 2014. Check Hayden . E. . free.
- 10.1038/521015a. Pint-sized DNA sequencer impresses first users. Nature. 521. 7550. 15–6. 2015. Check Hayden . E.. 25951262. 2015Natur.521...15C. free.
- Web site: IP Group PLC – Portfolio company Oxford Nanopore announces £70m fundraising – IP Group PLC . November 20, 2015 . dead . https://web.archive.org/web/20151121024012/http://www.ipgroupplc.com/media-centre/ip-group-news/2015/2015-07-21.aspx . November 21, 2015 .
- Loman. Nicholas J. Watson. Mick. Successful test launch for nanopore sequencing. Nature Methods. 12. 4. 2015. 303–304. 1548-7091. 10.1038/nmeth.3327. 25825834. 5604121.
- News: Oxford Nanopore Launches GridIon X5 Nanopore Sequencer, Details Product Improvements. GenomeWeb. 2017-07-06. en.
- Web site: GridION X5. nanoporetech.com. en. 2017-07-06.
- Web site: Community - Oxford Nanopore Technologies. 2015-06-17. https://web.archive.org/web/20150627171625/https://nanoporetech.com/community/promethion-access-programme. 2015-06-27. dead.
- Web site: Specifications - Community - Oxford Nanopore Technologies. 2015-11-20. https://web.archive.org/web/20160601141421/https://www.nanoporetech.com/community/specifications. 2016-06-01. dead.
- Web site: Oxford Nanopore CTO Clive Brown's Talk at London Calling: MinION ASIC, volTRAX, promethION. Next Gen Seek. 14 May 2015.
- Web site: VolTRAX. nanoporetech.com. 2016-10-17.
- Oxford Nanopore: we want to create the internet of living things. Wired UK.
- Web site: Metrichor. metrichor.com. 2016-08-17.
- Web site: SmidgION - Products & services - Oxford Nanopore Technologies. www2.nanoporetech.com. 2016-08-17. https://web.archive.org/web/20160823022022/https://www2.nanoporetech.com/products-services/smidgion. 2016-08-23. dead.
- Check Hayden. Erika. Nanopore genome sequencer makes its debut. Nature. 2012. 1744-7933. 10.1038/nature.2012.10051. free.