Neomycin Explained

Verifiedfields:changed
Watchedfields:changed
Verifiedrevid:462259305
Iupac Name:(2RS,3S,4S,5R)-5-Amino-2-(aminomethyl)-6-((2R,3S,4R,5S)-5-((1R,2R,5R,6R)-3,5-diamino-2-((2R,3S,4R,5S)-3-amino-6-(aminomethyl)-4,5-dihydroxytetrahydro-2H-pyran-2-yloxy)-6-hydroxycyclohexyloxy)-4-hydroxy-2-(hydroxymethyl)tetrahydrofuran-3-yloxy)tetrahydro-2H-pyran-3,4-diol
Tradename:Neo-rx
Pregnancy Us:D
Legal Us:Rx-only
Legal Us Comment:but OTC in Neosporin and similar ointments
Routes Of Administration:Topical, oral
Bioavailability:None
Protein Bound:N/A
Metabolism:N/A
Elimination Half-Life:2 to 3 hours
Cas Number:1404-04-2
Atc Prefix:A01
Atc Suffix:AB08
Atc Supplemental:,,,,,,,
Pubchem:8378
Iuphar Ligand:709
Drugbank:DB00994
Chemspiderid:8075
Unii:I16QD7X297
Kegg:D08260
Chebi:7508
Chembl:449118
C:23
H:46
N:6
O:13
Smiles:O([C@H]3[C@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@H]1O[C@@H](CN)[C@@H](O)[C@H](O)[C@H]1N)[C@H]2O)[C@@H](O)[C@H](N)C[C@@H]3N)[C@H]4O[C@@H]([C@@H](O)[C@H](O)[C@H]4N)CN
Stdinchi:1S/C23H46N6O13/c24-2-7-13(32)15(34)10(28)21(37-7)40-18-6(27)1-5(26)12(31)20(18)42-23-17(36)19(9(4-30)39-23)41-22-11(29)16(35)14(33)8(3-25)38-22/h5-23,30-36H,1-4,24-29H2/t5-,6+,7+,8?,9+,10+,11-,12+,13+,14-,15+,16-,17+,18-,19+,20-,21+,22-,23-/m0/s1
Stdinchikey:PGBHMTALBVVCIT-DPNHOFNISA-N

Neomycin is an aminoglycoside antibiotic that displays bactericidal activity against Gram-negative aerobic bacilli and some anaerobic bacilli where resistance has not yet arisen. It is generally not effective against Gram-positive bacilli and anaerobic Gram-negative bacilli. Neomycin comes in oral and topical formulations, including creams, ointments, and eyedrops. Neomycin belongs to the aminoglycoside class of antibiotics that contain two or more amino sugars connected by glycosidic bonds.

Neomycin was discovered in 1949 by microbiologist Selman Waksman and his student Hubert Lechevalier at Rutgers University. Neomycin received approval for medical use in 1952.[1] Rutgers University was granted the patent for neomycin in 1957.[2]

Discovery

Neomycin was discovered in 1949 by the microbiologist Selman Waksman and his student Hubert Lechevalier at Rutgers University. It is produced naturally by the bacterium Streptomyces fradiae.[3] Synthesis requires specific nutrient conditions in either stationary or submerged aerobic conditions. The compound is then isolated and purified from the bacterium.[4]

Medical uses

Neomycin is typically applied as a topical preparation, such as Neosporin (neomycin/polymyxin B/bacitracin). The antibiotic can also be administered orally, in which case it is usually combined with other antibiotics. Neomycin is not absorbed from the gastrointestinal tract and has been used as a preventive measure for hepatic encephalopathy and hypercholesterolemia. By killing bacteria in the intestinal tract, Neomycin keeps ammonia levels low and prevents hepatic encephalopathy, especially before gastrointestinal surgery.

Waksman and Lechevalier originally noted that neomycin was active against streptomycin-resistant bacteria as well as Mycobacterium tuberculosis, the causative agent for tuberculosis. Neomycin has also been used to treat small intestinal bacterial overgrowth. Neomycin is not administered via injection, as it is extremely nephrotoxic (damaging to kidney function) even when compared to other aminoglycosides. The exception is when neomycin is included, in small quantities, as a preservative in some vaccines – typically 25 μg per dose.[5]

Spectrum

Similar to other aminoglycosides, neomycin has excellent activity against Gram-negative bacteria and is partially effective against Gram-positive bacteria. It is relatively toxic to humans, with allergic reactions noted as a common adverse reaction (see: hypersensitivity). Physicians sometimes recommend using antibiotic ointments without neomycin, such as Polysporin.[6] The following represents minimum inhibitory concentration (MIC) susceptibility data for a few medically significant Gram-negative bacteria.[7]

Side effects

In 2005–06, Neomycin was the fifth-most-prevalent allergen in patch test results (10.0%).[8] It was named Allergen of the Year in 2010.[9] Neomycin is also a known GABA gamma-Aminobutyric acid antagonist and can be responsible for seizures and psychosis.[10] Like other aminoglycosides, neomycin has been shown to be ototoxic, causing tinnitus, hearing loss, and vestibular problems in a small number of patients. Neomycin affects the cochlea, which is found in the inner ear.[11] Hearing loss is caused by ear hair cell death, which occurs in response to treatment with neomycin.[12] Patients with existing tinnitus or sensorineural hearing loss are advised to speak with a healthcare practitioner about the risks and side effects prior to taking this medication.

Molecular biology

Activity

Neomycin's antibacterial activity stems from its binding to the 30S subunit of the prokaryotic ribosome, where it inhibits prokaryotic translation of mRNA.[13]

Neomycin also exhibits a high binding affinity for phosphatidylinositol 4,5-bisphosphate (PIP2), a phospholipid component of cell membranes.[14]

Resistance

Neomycin resistance is conferred by either one of two kanamycin kinase genes.[15] Genes conferring neomycin-resistance are commonly included in DNA plasmids used to establish stable mammalian cell lines expressing cloned proteins in culture. Many commercially available protein expression plasmids contain a neo-resistance gene as a selectable marker.Currently, research is being performed to understand if derivatives of neomycin have the same antibiotic effects while still being effective against neomycin-resistant bacteria.[16]

Biosynthetic pathway

Neomycin was first isolated from the Streptomyces fradiae and Streptomyces albogriseus in 1949 (NBRC 12773).[17] Neomycin is a mixture of neomycin B (framycetin); and its epimer neomycin C, the latter component accounting for some 5–15% of the mixture. It is a basic compound that is most active with an alkaline reaction. It is also thermostable and soluble in water (while insoluble in organic solvents).[18] Neomycin has good activity against Gram-positive and Gram-negative bacteria, but is ototoxic. Its use is thus restricted to the oral treatment of intestinal infections.[19]

Neomycin B is composed of four linked moieties: D-neosamine, 2-deoxystreptamine (2-DOS), D-ribose, and L-neosamine.

Neomycin A, also called neamine, contains D-neosamine and 2-deoxystreptamine. Six genes are responsible for neamine biosynthesis: DOIS gene (btrC, neo7); L-glutamine:DOI aminotransferase gene (btrS, neo6); a putative glycosyltransferase gene (btrM, neo8); a putative aminotransferase (similar to glutamate-1-semialdehyde 2,1-aminomutase) gene (btrB, neo18); a putative alcohol dehydrogenase gene (btrE, neo5); and another putative dehydrogenase (similar to chorine dehydrogenase and related flavoproteins) gene (btrQ, neo11).[20] A deacetylase acting to remove the acetyl group on N-acetylglucosamine moieties of aminoglycoside intermediates (Neo16) remains to be clarified (sequence similar to BtrD).[21]

Next is the attachment of the D-ribose via ribosylation of neamine, using 5-phosphoribosyl-1-diphosphate (PRPP) as the ribosyl donor (BtrL, BtrP);[22] glycosyltransferase (potential homologues RibF, LivF, Parf) gene (Neo15).[23]

Neosamine B (L-neosamine B) is most likely biosynthesized in the same manner as the neosamine C (D-niosamine) in neamine biosynthesis, but with an additional epimerization step required to account for the presence of the epimeric neosamine B in neomycin B.[24]

Neomycin B and C are 23-carbon molecules with a four-ring structure. Three of the rings are six-membered, and one is five-membered.[25] Neomycin B and Neomycin C are stereoisomers of each other and differ by only one stereocenter one giving the R conformation and the other giving the S conformation.[26] Neomycin C can undergo enzymatic synthesis from ribostamycin.[27]

Composition

Standard grade neomycin is composed of several related compounds including neomycin A (neamine), neomycin B (framycetin), neomycin C, and a few minor compounds found in much lower quantities. Neomycin B is the most active component in neomycin followed by neomycin C and neomycin A. Neomycin A is an inactive degradation product of the C and B isomers.[28] The quantities of these components in neomycin vary from lot-to-lot depending on the manufacturer and manufacturing process.[29]

DNA binding

Aminoglycosides such as neomycin are known for their ability to bind to duplex RNA with high affinity.[30] The association constant for neomycin with A-site RNA is in the 109 M−1 range.[31] However, more than 50 years after its discovery, its DNA-binding properties were still unknown. Neomycin has been shown to induce thermal stabilization of triplex DNA, while having little or almost no effect on the B-DNA duplex stabilization.[32] Neomycin was also shown to bind to structures that adopt an A-form structure, triplex DNA being one of them. Neomycin also includes DNA:RNA hybrid triplex formation.[33]

Notes and References

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  2. US . 2799620 . Neomycin and process of preparation . Waksman SA, Lechevalier HA . Rutgers Research and Educational Foundation . 18 July 1957 . . .
  3. Web site: The Nobel Prize in Physiology or Medicine 1952. Nobel Foundation. 2008-10-29. 2018-06-19. https://web.archive.org/web/20180619213821/https://www.nobelprize.org/nobel_prizes/medicine/laureates/1952/waksman-bio.html. live.
  4. Book: Neomycin . Pharmaceutical Manufacturing Encyclopedia . 3rd . 3 . 2007 . 2415–2416 .
  5. Heidary N, Cohen DE . Hypersensitivity reactions to vaccine components . Dermatitis . 16 . 3 . 115–20 . September 2005 . 16242081 . 10.1097/01206501-200509000-00004 . 31248441 .
  6. Web site: Your Medicine Cabinet . DERMAdoctor.com, Inc. . 2008-10-19 . dead . https://web.archive.org/web/20090709093022/http://www.dermadoctor.com/article_Your-Medicine-Cabinet_43.html . 2009-07-09.
  7. Web site: Neomycin sulfate, EP Susceptibility and Minimum Inhibitory Concentration (MIC) Data . TOKU-E . 2014-03-31 . 2015-12-22 . https://web.archive.org/web/20151222095539/http://www.toku-e.com/Assets/MIC/Neomycin%20sulfate%20EP.pdf . live .
  8. Zug KA, Warshaw EM, Fowler JF, Maibach HI, Belsito DL, Pratt MD, Sasseville D, Storrs FJ, Taylor JS, Mathias CG, Deleo VA, Rietschel RL, Marks J . 6 . Patch-test results of the North American Contact Dermatitis Group 2005-2006 . Dermatitis . 20 . 3 . 149–60 . 2009 . 19470301 . 10.2310/6620.2009.08097 . 24088485 .
  9. McNamara, Damian. (2010). Neomycin Is Named Contact Allergen of the Year
  10. Lee C, de Silva AJ . Interaction of neuromuscular blocking effects of neomycin and polymyxin B . Anesthesiology . 50 . 3 . 218–20 . March 1979 . 219730 . 10.1097/00000542-197903000-00010 . 13551808 .
  11. Langman, A. Neomycin ototoxicity. Otolaryngology Head and Neck Surgery 1994, 110, 441-444.
  12. Langman, A. Neomycin ototoxicity. Otolaryngology Head and Neck Surgery 1994, 110, 441-444.
  13. Mehta R, Champney WS . Neomycin and paromomycin inhibit 30S ribosomal subunit assembly in Staphylococcus aureus . Current Microbiology . 47 . 3 . 237–43 . September 2003 . 14570276 . 10.1007/s00284-002-3945-9 . 23170091 .
  14. Gabev E, Kasianowicz J, Abbott T, McLaughlin S . Binding of neomycin to phosphatidylinositol 4,5-bisphosphate (PIP2) . Biochimica et Biophysica Acta (BBA) - Biomembranes . 979 . 1 . 105–12 . February 1989 . 2537103 . 10.1016/0005-2736(89)90529-4 .
  15. Web site: G418/neomycin-cross resistance? . 2008-10-19 . 2009-06-25 . https://web.archive.org/web/20090625211444/http://www.bio.net/bionet/mm/methods/1999-March/073912.html . live .
  16. Bera, S.; Zhanel, G.; Schweizer, F. Design, Synthesis, and Antibacterial Activities of Neomycin−Lipid Conjugates: Polycationic Lipids with Potent Gram-Positive Activity | Journal of Medicinal Chemistry. Journal of Medicinal Chemistry 2003, 51, 6160-6164.
  17. Waksman SA, Lechevalier HA, Harris DA . Neomycin—Production and Antibiotic Properties 123 . The Journal of Clinical Investigation . 28 . 5 Pt 1 . 934–9 . September 1949 . 16695766 . 438928 . 10.1172/JCI102182 .
  18. Waksman SA, Lechevalier HA . Neomycin, a New Antibiotic Active against Streptomycin-Resistant Bacteria, including Tuberculosis Organisms . Science . New York, N.Y. . 109 . 2830 . 305–7 . March 1949 . 17782716 . 10.1126/science.109.2830.305 . 1949Sci...109..305W .
  19. Book: Dewick M . Medicinal natural products: a biosynthetic approach. March 2009. John Wiley and Sons Ltd. . The Atrium, Southern Gate, Chichester, West Sussex, United Kingdom . 978-0-470-74168-9 . 508, 510, 511 . 3rd .
  20. Kudo F, Yamamoto Y, Yokoyama K, Eguchi T, Kakinuma K . Biosynthesis of 2-deoxystreptamine by three crucial enzymes in Streptomyces fradiae NBRC 12773 . The Journal of Antibiotics . 58 . 12 . 766–74 . December 2005 . 16506694 . 10.1038/ja.2005.104 . free .
  21. Park JW, Park SR, Nepal KK, Han AR, Ban YH, Yoo YJ, Kim EJ, Kim EM, Kim D, Sohng JK, Yoon YJ . 6 . Discovery of parallel pathways of kanamycin biosynthesis allows antibiotic manipulation . Nature Chemical Biology . 7 . 11 . 843–52 . October 2011 . 21983602 . 10.1038/nchembio.671 .
  22. Kudo F, Fujii T, Kinoshita S, Eguchi T . Unique O-ribosylation in the biosynthesis of butirosin . Bioorganic & Medicinal Chemistry . 15 . 13 . 4360–8 . July 2007 . 17482823 . 10.1016/j.bmc.2007.04.040 .
  23. Fan Q, Huang F, Leadlay PF, Spencer JB . The neomycin biosynthetic gene cluster of Streptomyces fradiae NCIMB 8233: genetic and biochemical evidence for the roles of two glycosyltransferases and a deacetylase . Organic & Biomolecular Chemistry . 6 . 18 . 3306–14 . September 2008 . 18802637 . 10.1039/B808734B . 29942953 .
  24. Llewellyn NM, Spencer JB . Biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics . Natural Product Reports . 23 . 6 . 864–74 . December 2006 . 17119636 . 10.1039/B604709M .
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  27. Kudo F, Kawashima T, Yokoyama K, Eguchi T . Enzymatic preparation of neomycin C from ribostamycin . The Journal of Antibiotics . 62 . 11 . 643–6 . November 2009 . 19713992 . 10.1038/ja.2009.88 . free .
  28. Book: Cammack R, Attwood TK, Campbell PN, Parish JH, Smith AD, Stirling JL, Vella F . Oxford Dictionary of Biochemistry and Molecular Biology . 2nd . neomycin . Oxford University Press . 2006 . 453 .
  29. Tsuji K, Robertson JH, Baas R, McInnis DJ . Comparative study of responses to neomycins B and C by microbiological and gas-liquid chromatographic assay methods . Applied Microbiology . 18 . 3 . 396–8 . September 1969 . 4907002 . 377991 . 10.1128/AEM.18.3.396-398.1969 .
  30. Jin Y, Watkins D, Degtyareva NN, Green KD, Spano MN, Garneau-Tsodikova S, Arya DP . Arginine-linked neomycin B dimers: synthesis, rRNA binding, and resistance enzyme activity . MedChemComm . 7 . 1 . 164–169 . January 2016 . 26811742 . 4722958 . 10.1039/C5MD00427F .
  31. Kaul M, Pilch DS . Thermodynamics of aminoglycoside-rRNA recognition: the binding of neomycin-class aminoglycosides to the A site of 16S rRNA . Biochemistry . 41 . 24 . 7695–706 . June 2002 . 12056901 . 10.1021/bi020130f .
  32. Arya DP, Coffee RL . DNA triple helix stabilization by aminoglycoside antibiotics . Bioorganic & Medicinal Chemistry Letters . 10 . 17 . 1897–9 . September 2000 . 10987412 . 10.1016/S0960-894X(00)00372-3 .
  33. Arya DP, Coffee RL, Charles I . Neomycin-induced hybrid triplex formation . Journal of the American Chemical Society . 123 . 44 . 11093–4 . November 2001 . 11686727 . 10.1021/ja016481j .