| Competition: | Moldovan National Division |
| Season: | 1999–2000 |
| Prevseason: | 1998–99 |
| Nextseason: | 2000–01 |
Statistics of Moldovan National Division for the 1999–2000 season.
It was contested by 10 teams and Zimbru Chişinău won the championship.
| Pos. | Player | Club | Goals | |
|---|---|---|---|---|
| 1 |  Serghei Rogaciov | Sheriff Tiraspol | 20 | |
| 2 | Victor Berco | Zimbru Chișinău | 15 | |
| Vladimir Pustovit | Moldova Gaz / Constructorul | 15 | ||
| 4 | Vladimir Dovghii | Constructorul Chișinău | 14 | |
| Iurie Miterev | Zimbru Chișinău | |||
| 6 | Tiligul Tiraspol | 12 | ||
 David Mudjiri | Sheriff Tiraspol | |||
| Nistru-Unisport Otaci | ||||
| 9 | Agro Chișinău | 11 |