| Competition: | Meistriliiga |
| Season: | 1998 |
| Winners: | Flora (4th title) |
| League Topscorer: | Konstantin Nahk (13) |
| Prevseason: | 1997–98 |
| Nextseason: | 1999 |
The 1998 Meistriliiga was the eighth season of the Meistriliiga, Estonia's premier football league. The season was unusually short, played in the second half of 1998 to switch back to Nordic spring-to-autumn season format in the next year. Flora won their fourth title.
Eesti Põlevkivi Jõhvi won 5-2 on aggregate and retained their Meistriliiga spot for the 1999 season.
| Rank | Player | Club | Goals[1] |
|---|---|---|---|
| 1 |  Konstantin Kolbasenko | Tallinna Sadam | 13 |
| 2 | Andrei Krõlov | Tallinna Sadam | 10 |
| Andres Oper | Flora | ||
| Indrek Zelinski | Flora | ||
| 5 |  Dmitri Lipartov | Narva Trans | 7 |
 Tomas Ražanauskas | Flora |