This is a list of Malaysian football transfers for the 2013 first transfer window. Moves featuring Malaysia Super League, Malaysia Premier League and Malaysia FAM Cup club are listed.
All clubs without a flag are Malaysian. Otherwise it will be stated.
 V. Kavi Chelvan | Free | |||
| Afiq Azmi | Free | |||
 Francis Doe | Free | |||
| S. Kunanlan | Free | |||
 George Boateng | Nottingham Forest | Free | ||
 Caleb Folan | Birmingham City | Free | ||
| Mahali Jasuli | Free | |||
| Aidil Zafuan | Free[2] | |||
| Zaquan Adha | Free | |||
| Azmi Muslim | Free | |||
| Safiq Rahim | Free | |||
| Muslim Ahmad | Free | |||
| Nurul Azwan Roya | Free | |||
| Norshahrul Idlan | Free[3] | |||
| Shukur Jusoh | Free | |||
| Ramzul Zahini | Free | |||
 Effa Owona | Free | |||
| Wan Azraie | Free | |||
| Norhisham Hassan | Free | |||
| Syed Adney | Free | |||
| Farderin Kadir | Free | |||
| Shazlan Alias | Free | |||
| Rosdi Talib | Free | |||
| Farizal Marlias | Free | |||
| Abdul Hadi Yahya | Free | |||
| Azlan Ismail | Free | |||
| Chanturu Suppiah | Free | |||
| Shukor Adan | Free | |||
| Amirul Hadi | Free | |||
| Razman Roslan | Free | |||
| Nasril Nourdin | Free | |||
| Azidan Sarudin | Free | |||
| Aris Zaidi | Free | |||
| Tuan Muhamad Faim | Free | |||
| Khairul Izuan | Free | |||
| Izuan Salahuddin | Loan return | |||
| Faiz Subri | Free | |||
| Zairo Anuar | Free | |||
| K. Nanthakumar | Free | |||
| Norhadi Ubaidillah | Free | |||
| Haris Safwan | Free | |||
 Lek Kćira | Shahin Bushehr | Free | ||
 Zakaria Charara | Al-Nejmeh | Free | ||
| Mijo Dadić |  Madura United | Free | ||
| Mohammed Ghaddar | Free | |||
| Aliff Alias | Free | |||
| Badrul Hisani | Free | |||
| Shafuan Adli Shaari | Free | |||
| Atif Hanif | Free | |||
| Farouk Hashim | Free | |||
| Wan Mohd Alif Khairee | Free | |||
| Afizuddin Ali | Free | |||
| Afiq Akhmal Zunaidi | Free | |||
| P. Saran | Free | |||
| P. Ragunath | Free | |||
| Hafiz Abu Hassan | Free | |||
| Ammerrul Hisyam Amran | Free | |||
| Hanif Mohd Noor | Free | |||
| Shahruddin Ismail | Free | |||
| Romdhizat Jamian | Free | |||
| Nurfirdaus Roswanan | Free | |||
| Noraiman Talib | Free | |||
| Khairuddin Ramli | Free | |||
| Azrul Hafiz Amran | Free | |||
| Ailim Fahmi | Free | |||
| Khairul Ramadhan | Free | |||
| Faizal Sumar | Free | |||
| Abdullah Am Ahmad | Free | |||
| Khairul Asyraf Ramli | Free | |||
| Syafiq Abdul Samad | Free | |||
| Khairool Anas Safri | Free | |||
| Rozaidi Abdul Rahim | Free | |||
| Hairol Fazreen | Free | |||
| Hafiz Abu Bakar | Free | |||
| Haziq Ahmad Fuad | Free | |||
 Dani Güiza | Getafe | |||
| Nizad Ayub | ||||
| Emmanuel Okine | ||||
| Denny Antwi |
| Nizam Daud | |||
| Firdaus Yusoff | |||
| Afandi Zamzam | |||
| Faqeem Aswad Mohd Fauzi | |||
| Eqbal Harizam | |||
| Hafiz Deli | |||
| Elfie Elyaz Harizam | |||
| L. Phul Sakh | |||
 Mahmadu Alphajor Bah | |||
| Lamin Conteh |