| Johnny Thomas | |
| Birth Date: | 19 October 1956 |
| Birth Place: | Bay Springs, Mississippi, U.S. |
| Player Years1: | 1974–1977 |
| Player Team1: | Alcorn State |
| Coach Years1: | 1980–1981 |
| Coach Team1: | Mississippi Valley State (LB/DE) |
| Coach Years2: | 1982–1985 |
| Coach Team2: | Mississippi Valley State (ST/RC) |
| Coach Years3: | 1986 |
| Coach Team3: | Alabama State (ST/RC) |
| Coach Years4: | 1987–1997 |
| Coach Team4: | Arkansas–Pine Bluff (AHC/ST/RC) |
| Coach Years5: | 1998–2007 |
| Coach Team5: | Alcorn State |
| Overall Record: | 48–61 |
| Championships: | 1 SWAC East Division (2003) |
John D. Thomas (born October 19, 1956) is a former American football player and coach.[1] He served as the head football coach at Alcorn State University from 1998 to 2007, compiling a record of 48–61. He is the brother of College Football Hall of Fame inductee Dennis Thomas.[2]