This is an incomplete list of islands of Estonia. There are 2355 islands in total.[1]
| – | Saaremaa and Muhu | 2,871 | 33,123 | |||
| 1. | 2,673 | 31,304 | Air link to Tallinn; car ferry via Muhu Island | |||
| – | Hiiumaa and Kassari | 1,008 | 9,335 | |||
| 2. | 989 | 8,995 | Air link to Tallinn; car ferry to Rohuküla | |||
| 3. | 198 | 1,819 | Car ferry to Virtsu | |||
| 4. | 93 | 411 | Car ferry to Rohuküla | |||
| – | Pakri Islands | 24.7 | 5 | |||
| 5. | 19.3 | 340 | Via Hiiumaa Island | |||
| 6. | 18.6 | 9 | Seasonal passenger ferry to Tallinn | |||
| 7. | 16.4 | 686 | Car ferry to Munalaid and Pärnu | |||
| 8. | 12.9 | 5 | Seasonal passenger ferries to Kurkse and Paldiski | |||
| 9. | 11.6 | – | Via Väike-Pakri Island | |||
| 10. | 11.4 | 127 | Seasonal passenger ferries (with limited and seasonally adjusted car capacity) to Munalaid and Pärnu; Seasonal air traffic to Pärnu | |||
| 11. | 8.8 | 30 | Passenger ferry (with limited and seasonally-adjusted car capacity) to Roomassaare | |||
| 12. | 8.8 | 22 | Passenger ferry (with limited and seasonally-adjusted car capacity) to Papissaare and a limited-use track through shallow waters to Kuusnõmme, both on Saaremaa Island | |||
| 13. | 7.8 | 99 | Car ferry to Laaksaare; seasonal passenger cruise ferry to Tartu | |||
| 14. | 6.4 | 169 | Car ferry to Leppneeme | |||
| 15. | 4.6 | 5 | Seasonal tours from Dirhami | |||
| 16. | 3.9 | – | Limited-use track through shallow waters to Hiiumaa Island | |||
| 17. | 2.9 | 11 | Seasonal passenger ferry to Tallinn | |||
| 18. | 2.6 | 1 | Limited-use track through shallow waters to Muhu Island | |||
| 19. | 2.5 | – | Limited-use track through shallow waters to Muhu Island | |||
| 20. | 2.5 | – | – | |||
| 20. | Suur-Tulpe | 2.3 | – | Road (no longer an island) | ||
| 21. | 1.9 | – | ||||
| 23. | 1.9 | 52 | Car ferries and passenger ferries to Munalaid | |||
| 24. | 1.8 | – | – | |||
| 25. | 1.7 | 4 | Charter passenger ferry | |||
| 26. | Heinlaid | 1.6 | – | – | ||
| 27. | 1.4 | – | – | |||
| 28. | 1.4 | – | ||||
| 29. | 1.1 | – | – | |||
| 30. | 1 | – | – | |||
| 31. | 0.9 | – | – | |||
| 32. | 0.6 | – | – | |||
| 33. | 0.6 | – | – | |||
| 34. | 0.06 | – | – | |||
| 35. | 0.06 | – | – |