Hyperbolic geometric graph explained
A hyperbolic geometric graph (HGG) or hyperbolic geometric network (HGN) is a special type of spatial network where (1) latent coordinates of nodes are sprinkled according to a probability density function into ahyperbolic space of constant negative curvature and (2) an edge between two nodes is present if they are close according to a function of the metric[1] [2] (typically either a Heaviside step function resulting in deterministic connections between vertices closer than a certain threshold distance, or a decaying function of hyperbolic distance yielding the connection probability). A HGG generalizes a random geometric graph (RGG) whose embedding space is Euclidean.
Mathematical formulation
with a vertex
set V (
cardinality
) and an edge set
E constructed by considering the nodes as points placed onto a 2-dimensional hyperbolic space
of constant negative
Gaussian curvature,
and cut-off radius
, i.e. the radius of the
Poincaré disk which can be visualized using a
hyperboloid model.Each point
has hyperbolic polar coordinates
with
and
.
The hyperbolic law of cosines allows to measure the distance
between two points
and
,
\cosh(\zetadij)=\cosh(\zetari)\cosh(\zetarj)
-\sinh(\zetari)\sinh(\zetarj)\cos(\underbrace{\pi-|\pi-|\thetai-\thetaj||}\Delta).
The angle
is the (smallest) angle between the two
position vectors.
In the simplest case, an edge
is established iff (if and only if) two nodes are within a certain
neighborhood radius
,
, this corresponds to an influence threshold.
Connectivity decay function
In general, a link will be established with a probability depending on the distance
. A
connectivity decay function
represents the probability of assigning an edge to a pair of nodes at distance
. In this framework, the simple case of
hard-code neighborhood like in
random geometric graphs is referred to as
truncation decay function.
[3] Generating hyperbolic geometric graphs
Krioukov et al. describe how to generate hyperbolic geometric graphs with uniformly random node distribution (as well as generalized versions) on a disk of radius
in
. These graphs yield a power-law distribution for the node degrees. The angular coordinate
of each point/node is chosen uniformly random from
, while the density function for the radial coordinate r is chosen according to the
probability distribution
:
\rho(r)=\alpha
| \sinh(\alphar) |
\cosh(\alphaR)-1 |
The growth parameter
controls the distribution: For
, the distribution is uniform in
, for smaller values the nodes are distributed more towards the center of the disk and for bigger values more towards the border. In this model, edges between nodes
and
exist iff
or with probability
if a more general connectivity decay function is used. The average degree is controlled by the radius
of the hyperbolic disk. It can be shown, that for
the node degrees follow a power law distribution with exponent
.
The image depicts randomly generated graphs for different values of
and
in
. It can be seen how
has an effect on the distribution of the nodes and
on the connectivity of the graph. The native representation where the distance variables have their true hyperbolic values is used for the visualization of the graph, therefore edges are straight lines.
Quadratic complexity generator
Source:[4]
The naive algorithm for the generation of hyperbolic geometric graphs distributes the nodes on the hyperbolic disk by choosing the angular and radial coordinates of each point are sampled randomly. For every pair of nodes an edge is then inserted with the probability of the value of the connectivity decay function of their respective distance. The pseudocode looks as follows:
for
to
do
r\gets
acosh(1+(\cosh\alphaR-1)U[0,1])
for every pair
do if
then
return
is the number of nodes to generate, the distribution of the radial coordinate by the probability density function
is achieved by using
inverse transform sampling.
denotes the uniform sampling of a value in the given interval. Because the algorithm checks for edges for all pairs of nodes, the runtime is quadratic. For applications where
is big, this is not viable any more and algorithms with subquadratic runtime are needed.
Sub-quadratic generation
To avoid checking for edges between every pair of nodes, modern generators use additional data structures that partition the graph into bands.[5] [6] A visualization of this shows a hyperbolic graph with the boundary of the bands drawn in orange. In this case, the partitioning is done along the radial axis. Points are stored sorted by their angular coordinate in their respective band. For each point
, the limits of its hyperbolic circle of radius
can be (over-)estimated and used to only perform the edge-check for points that lie in a band that intersects the circle. Additionally, the sorting within each band can be used to further reduce the number of points to look at by only considering points whose angular coordinate lie in a certain range around the one of
(this range is also computed by over-estimating the hyperbolic circle around
).
Using this and other extensions of the algorithm, time complexities of
(where
is the number of nodes and
the number of edges) are possible with high probability.
[7] Findings
For
(Gaussian curvature
), HGGs form an
ensemble of networks for which is possible to express the
degree distribution analytically as closed form for the
limiting case of large number of nodes. This is worth mentioning since this is not true for many ensembles of graphs.
Applications
HGGs have been suggested as promising model for social networks where the hyperbolicity appears through a competition between similarity and popularity of an individual.[8]
Notes and References
- Barthélemy. Marc. Spatial networks. Physics Reports. 499. 1–3. 1–101. 10.1016/j.physrep.2010.11.002. 1010.0302. 2011PhR...499....1B. 2011. 4627021.
- Krioukov. Dmitri. Papadopoulos. Fragkiskos. Kitsak. Maksim. Vahdat. Amin. Boguñá. Marián. Hyperbolic geometry of complex networks. Physical Review E. 82. 3. 1006.5169. 10.1103/PhysRevE.82.036106. 2010PhRvE..82c6106K. 21230138. 2010. 036106. 6451908.
- Barnett. L.. Di Paolo. E.. Bullock. S.. Spatially embedded random networks. Physical Review E. 76. 5. 10.1103/PhysRevE.76.056115. 2007PhRvE..76e6115B. 2007. 056115. 18233726. 2023-02-04. 2023-02-04. https://web.archive.org/web/20230204160403/https://eprints.soton.ac.uk/266764/1/sern_physreve.pdf. live.
- Krioukov. Dmitri. Orsini. Chiara. Aldecoa. Rodrigo. 2015-03-17. Hyperbolic Graph Generator. en. 10.1016/j.cpc.2015.05.028. 1503.05180. 196. Computer Physics Communications. 492–496. 2015CoPhC.196..492A. 8454036.
- Book: von Looz. Moritz. Meyerhenke. Henning. Prutkin. Roman. Algorithms and Computation . Generating Random Hyperbolic Graphs in Subquadratic Time . 2015. Elbassioni. Khaled. Makino. Kazuhisa. Lecture Notes in Computer Science. 9472. en. Springer Berlin Heidelberg. 467–478. 10.1007/978-3-662-48971-0_40. 9783662489710.
- Meyerhenke. Henning. Laue. Sören. Özdayi. Mustafa. von Looz. Moritz. 2016-06-30. Generating massive complex networks with hyperbolic geometry faster in practice. arXiv.org . 1606.09481. 2016arXiv160609481V. en.
- Penschuck. Manuel. 2017. Generating Practical Random Hyperbolic Graphs in Near-Linear Time and with Sub-Linear Memory. Schloss Dagstuhl - Leibniz-Zentrum für Informatik GMBH, Wadern/Saarbruecken, Germany. Leibniz International Proceedings in Informatics (LIPIcs). 75. 26:1–26:21. en. 10.4230/lipics.sea.2017.26. free . 9783959770361. 2023-02-04. 2023-02-04. https://web.archive.org/web/20230204160404/https://drops.dagstuhl.de/opus/volltexte/2017/7621/. live.
- Papadopoulos. Fragkiskos. Kitsak. Maksim. Serrano. M. Ángeles. Boguñá. Marián. Krioukov. Dmitri. Popularity versus similarity in growing networks. Nature. 12 September 2012. 489. 7417. 537–540. 1106.0286. 10.1038/nature11459. 22972194. 2012Natur.489..537P. 4424179.