Campylobacterales Explained
The Campylobacterales are an order of Campylobacterota which make up the epsilon subdivision, together with the small family Nautiliaceae. They are Gram-negative. Most of the species are microaerophilic.[1]
Molecular signatures
Comparative genomic analysis has led to the identification of 49 proteins which are uniquely found in virtually all species of the order Campylobacterales. Additionally, two conserved signature indels have been identified which, along with the proteins, serve as molecular markers for the order. The indels are a three-amino-acid insertion in the B protein of the Uvr ABC system, and a two-amino-acid deletion in phenylalanyl-tRNA synthetase.[2]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI)[4]
Unassigned genera:
- "Flexispira" Bryner 1987
- "Candidatus Thioturbo" Muyzer et al. 2005
- "Thiofractor" Makita et al. 2012
- "Thiobarbaceae" AssiƩ et al. 2020
- "Candidatus Thiobarba" AssiƩ et al. 2020
See also
Notes and References
- Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. .
- Gupta, R. S. (2006). Molecular signatures (unique proteins and conserved indels) that are specific for the epsilon proteobacteria. BMC Genomics. 7:167.
- Web site: A.C. Parte. Campylobacterales. 2023-09-09. List of Prokaryotic names with Standing in Nomenclature (LPSN). et al..
- Web site: Sayers. Campylobacterales. 2023-09-09. National Center for Biotechnology Information (NCBI) taxonomy database. et al..
- Web site: The LTP . 20 November 2023.
- Web site: LTP_all tree in newick format. 20 November 2023.
- Web site: LTP_08_2023 Release Notes. 20 November 2023.
- Web site: GTDB release 08-RS214 . Genome Taxonomy Database. 10 May 2023.
- Web site: bac120_r214.sp_label . Genome Taxonomy Database. 10 May 2023.
- Web site: Taxon History . Genome Taxonomy Database. 10 May 2023.