major histocompatibility complex (human), class I, B53 | ||
Alleles | B*5301 B*5302 | |
Structure (See HLA-B) | ||
Symbol(s) | HLA-B | |
EBI-HLA | B*5301 | |
EBI-HLA | B*5302 | |
Locus | chr.6 6p21.31 | |
HLA-B53 (B53) is an HLA-B serotype. The serotype identifies the more common HLA-B*53 gene products.[1] The B53 sequence is identical to B35 but short sequence specifies a Bw4 rather than a Bw6 motif (as found in B35), indicating B53 is a recent product of gene conversion.[2] This suggests an origin for HLA-B53 involving a gene conversion of HLA-B35 by an allele containing this Bw4 sequence. (For terminology help see: HLA-serotype tutorial)
B*53 | B53 | B35 | Sample | |
allele | % | % | size (N) | |
5301 | 86 | 5 | 3054 | |
5302 | 80 | 20 | 5 |
freq | |||
ref. | Population | (%) | |
[4] | Akan Adiopodoume (Ivory Coast) | 22.7 | |
Rimaibe (Burkina Faso) | 22.3 | ||
Mossi (Burkina Faso) | 20.8 | ||
Bandiagara (Mali) | 15.9 | ||
Sawa (Cameroon) | 11.5 | ||
Lusaka (Zambia) | 10.2 | ||
Baka Pygmy (Cameroon) | 10.0 | ||
Guinea Bissau | 10.0 | ||
Harare Shona (Zimbabwe) | 9.3 | ||
Baloch (Iran) | 9.1 | ||
Kenya | 8.7 | ||
Canoncito Navajo (USA) | 8.5 | ||
Brahui (Pakistan) | 7.7 | ||
Niokholo Mandenka (Senegal) | 5.3 | ||
Croatia (2) | 5.0 | ||
Mongolia Khoton Tarialan | 4.9 | ||
Pakistan Baloch | 4.6 | ||
Casablanca (Morocco) | 3.7 | ||
Arratia Basque (Spain) | 3.3 | ||
Crete (Greece) | 3.2 | ||
Israel Arab Druse | 2.5 | ||
Israel Gaza Palestinians | 2.4 | ||
Amman (Jordan) | 2.4 | ||
Tunis (Tunisia) | 2.3 | ||
Tuva (2) (Russia) | 2.2 | ||
Oman | 2.1 | ||
France South East | 1.6 | ||
Saudi Arabia Guraiat and Hail | 1.5 | ||
Berber (Morocco) | 1.4 | ||
Georgia Svaneti Svans | 1.3 | ||
Mongolia Khalkh Ulaanbaatar | 1.2 | ||
Spain Catalonia Girona | 1.1 | ||
India Andhra Pradesh Golla | 1.0 | ||
Mongolia Khalha | 1.0 |
freq | |||
ref. | Population | (%) | |
Zimbabwe | 3.6 | ||
Zambia Lusaka | 2.3 | ||
N. Afr. Negroid | 2.1 | ||
Kenya Luo | 1.9 | ||
Cameroon Yaounde | 1.7 | ||
[5] | African American | 1.5 | |
Kenya Nandi | 1.3 | ||
American Hispanic | 0.2 | ||
' | |||
A*6802 : Cw*0401 : B*5301 | |||
Mali Bandihagara | 2.7 | ||
African American | 1.4 | ||
Kenya Nandi | 1.0 | ||
Hispanic American | 0.6 | ||
Caucasian American | 0.2 |
Despite its low frequency, the A36-Cw4-B53 haplotype is one of the most common A-Cw-B haplotypes, as it is the 4th most common in African Americans.