Global Biodata Coalition Explained

The Global Biodata Coalition is an organization promoting biocuration and fostering support of research funders for the sustainability of biological data resources.^{[1] [2] [3]}

Global Core Biodata Resources (GCBRs)

The organization maintains a list of resources, representing "critical components for ensuring the reproducibility and integrity of life sciences research."^[4]

As of 2023, the list includes the following organizations: ^[5]

• Alliance of Genome Resources
• BacDive
• BAR: Bio-Analytic Resource for Plant Biology
• Bgee
• BRENDA
• Catalogue of Life (COL)
  • CATH database Cellosaurus
• ChEBI
• ChEMBL
• CIViC: Clinical Interpretation of Variants in Cancer
• Clinical Genome Resource (ClinGen)
• DNA Data Bank of Japan (DDBJ Center)
• EcoCyc
• Ensembl
• Europe PMC
• European Nucleotide Archive (ENA)
• FlyBase
• GENCODE
• Gene Ontology (GO)
• Global Biodiversity Information Facility (GBIF)
• Genome Aggregation Database (gnomAD)
• Genome Sequence Archive (GSA)
• NHGRI-EBI Catalog of human genome-wide association studies (GWAS Catalog)
• Gene Expression Database (GXD)
• HGNC: HUGO Gene Nomenclature Committee
• Human Disease Ontology Knowledgebase (DO-KB)
• Human Protein Atlas
• IMEx: International Molecular Exchange Consortium
• InterPro
• IUPHAR/BPS Guide to PHARMACOLOGY
• LIPID MAPS
• LPSN: List of Prokaryotic names with Standing in Nomenclature
• MGD: Mouse Genome Database
• Orphadata Science
• PANTHER
• PharmGKB: Pharmacogenomics Knowledgebase
• Planteome (including the Plant Ontology)
• PomBase
• Protein Data Bank (PDB)
• ProteomeXchange Consortium
• Rat Genome Database (RGD)
• Reactome
• Rhea
• Saccharomyces Genome Database (SGD)
• SILVA
• STRING
• UCSC Genome Browser
• UniProt
• VEuPathDB
• WormBase
• ZFIN: The Zebrafish Information Network

External links

• Official website

Notes and References

1. Cook . Chuck . Cochrane . Guy . 2023-09-08 . The Global Biodata Coalition: Towards a sustainable biodata infrastructure . Biodiversity Information Science and Standards . 7 . 10.3897/biss.7.112303 . 2535-0897 . free . 2023-12-11 . 2023-12-11 . https://web.archive.org/web/20231211203254/https://biss.pensoft.net/article/112303/ . live .
2. Web site: 2023-11-27 . Global Biodata Coalition: White Paper on Open Data Strategies . 2023-12-11 . RDA . en . 2023-12-11 . https://web.archive.org/web/20231211203253/https://www.rd-alliance.org/global-biodata-coalition-white-paper-open-data-strategies . live .
3. Web site: Global Biodata Coalition coordinates worldwide funding of data resources . 2023-12-11 . Genome.gov . en . 2023-12-11 . https://web.archive.org/web/20231211203253/https://www.genome.gov/about-nhgri/Director/genomics-landscape/august-4-2022-global-biodata-coalition-coordinates-worldwide-funding-of-data-resources . live .
4. Web site: GBIF named a Global Core Biodata Resource . 2023-12-11 . www.gbif.org . en . 2023-12-11 . https://web.archive.org/web/20231211161518/https://www.gbif.org/news/6PHdgoyIF6RmI7u4VOouuD/gbif-named-a-global-core-biodata-resource . live .
5. Web site: List of Current Global Core Biodata Resources . 2023-12-11 . Global Biodata Coalition . en-US . 2023-12-11 . https://web.archive.org/web/20231211203253/https://globalbiodata.org/what-we-do/global-core-biodata-resources/list-of-current-global-core-biodata-resources/ . live .