The 1999 season was the eighth full year of competitive football in the Baltic country as an independent nation. The Estonia national football team played sixteen matches in 1999, and didn't qualify for Euro 2000 in Belgium and the Netherlands the next year.
| Pos | width=140 | Name | Min | Rem | Cap |
|---|---|---|---|---|---|
| GK | 90' | 68 | |||
| DF | 90' | 71 | |||
| DF | 90' | ||||
| DF | 90' | 46 | |||
| DF | 18 | ||||
| MF | 90' | 87 | |||
| MF | |||||
| MF | 90' | 26 | |||
| MF | 90' | 80 | |||
| MF | 90' | ||||
| FW | 52 | ||||
| Substitutes | |||||
| MF | |||||
| FW | |||||
| DF | |||||
Manager:  Teitur Thordarson |
| Pos | width=140 | Name | Min | Rem | Cap |
|---|---|---|---|---|---|
| GK | 90' | 69 | |||
| DF | 90' | 72 | |||
| DF | 90' | ||||
| DF | 90' | 47 | |||
| DF | 90' | 19 | |||
| MF | 90' | 88 | |||
| MF | 90' | ||||
| MF | 90' | 27 | |||
| MF | 90' | 81 | |||
| FW | |||||
| FW | 90' | 43 | |||
| Substitutes | |||||
| MF | 53 | ||||
| Manager: Teitur Thordarson |
| Pos | width=140 | Name | Min | Rem | Cap |
|---|---|---|---|---|---|
| GK | 90' | 4 | |||
| DF | 90' | 73 | |||
| DF | 90' | ||||
| DF | 90' | 48 | |||
| DF | 90' | 59 | |||
| MF | |||||
| MF | 90' | 89 | |||
| MF | 28 | ||||
| MF | 90' | 82 | |||
| FW | 54 | ||||
| FW | 90' | 44 | |||
| Substitutes | |||||
| MF | 20 | ||||
| DF | |||||
| FW | 54 | ||||
| GK | |||||
| DF | 1 | ||||
| DF | |||||
| MF | |||||
| Manager: Teitur Thordarson |
| Pos | width=140 | Name | Min | Rem | Cap |
|---|---|---|---|---|---|
| GK | 90' | 5 | |||
| DF | 90' | 74 | |||
| DF | |||||
| DF | 90' | 49 | |||
| DF | 90' | 1 | |||
| MF | 60 | ||||
| MF | 90 | ||||
| MF | 90' | 28 | |||
| MF | 90' | 83 | |||
| FW | 55 | ||||
| FW | 45 | ||||
| Substitutes | |||||
| FW | |||||
| FW | 9 | ||||
| DF | |||||
| MF | 21 | ||||
| DF | 2 | ||||
| Manager: Teitur Thordarson |
| Pos | width=140 | Name | Min | Rem | Cap |
|---|---|---|---|---|---|
| GK | 90' | 6 | |||
| DF | 90' | 75 | |||
| DF | 90' | 61 | |||
| DF | 90' | 50 | |||
| DF | 90' | 2 | |||
| MF | 10 | ||||
| MF | |||||
| MF | 29 | ||||
| MF | 90' | (pk) | 84 | ||
| FW | 55 | ||||
| FW | 46 | ||||
| Substitutes | |||||
| FW | 1 | ||||
| FW | |||||
| DF | 3 | ||||
| MF | 91 | ||||
| DF | |||||
| Manager: Teitur Thordarson |
| Pos | width=140 | Name | Min | Rem | Cap |
|---|---|---|---|---|---|
| GK | 90' | 7 | |||
| DF | 90' | 76 | |||
| DF | 90' | 62 | |||
| DF | 51 | ||||
| DF | 90' | 3 | |||
| MF | 11 | ||||
| MF | 90' | 85 | |||
| MF | 90' | 92 | |||
| MF | 4 | ||||
| FW | 2 | ||||
| FW | 47 | ||||
| Substitutes | |||||
| DF | 22 | ||||
| FW | 40 | ||||
| DF | |||||
| MF | 30 | ||||
| FW | |||||
| Manager: Teitur Thordarson[1] |
| Pos | width=140 | Name | Min | Rem | Cap |
|---|---|---|---|---|---|
| GK | 90' | 23 | |||
| DF | 77 | ||||
| DF | 90' | 21 | |||
| DF | 90' | 52 | |||
| DF | 90' | 4 | |||
| MF | 12 | ||||
| MF | 90' | 86 | |||
| MF | 90' | 93 | |||
| MF | 90' | 31 | |||
| FW | 26 | ||||
| FW | 90' | , | 48 | ||
| Substitutes | |||||
| DF | 23 | ||||
| FW | 41 | ||||
| MF | 63 | ||||