Epstein–Barr virus small nucleolar RNA 1 explained

Human herpesvirus 1 small nucleolar RNA
Symbol:v-snoRNA1
Rfam:RF01516
Rna Type:snoRNA

V-snoRNA1 is a box CD-snoRNA identified in B lymphocytes infected with the Epstein–Barr virus (human herpesvirus 4 (HHV-4)).[1] This snoRNA is the first known example of a snoRNA expressed from a viral genome.[2] It is homologous to eukaryotic snoRNAs because it contains the C and D boxes sequence motifs but lacks a terminal stem-loop structure. The nucleolar localization of v-snoRNA1 was determined by in situ hybridization. V-snoRNA1 can form into a ribonucleoprotein complex (snoRNP) as co-immunoprecipitation (CoIP) assays showed that this snoRNA interacts with the snoRNA core proteins, fibrillarin, Nop56, Nop58. It has also been proposed that this snoRNA may act as a miRNA-like precursor that is processed into 24-nucleotide-sized RNA fragments that target the 3'UTR of viral DNA polymerase mRNA.

See also

Notes and References

  1. Hutzinger R, Feederle R, Mrazek J, Schiefermeier N, Balwierz PJ, Zavolan M, Polacek N, Delecluse HJ, Hüttenhofer A . Expression and processing of a small nucleolar RNA from the Epstein-Barr virus genome . PLOS Pathogens . 5 . 8 . e1000547 . August 2009 . 19680535 . 2718842 . 10.1371/journal.ppat.1000547 . Cullen . Bryan R . free .
  2. Gardner PP, Bateman A, Poole AM . SnoPatrol: how many snoRNA genes are there? . Journal of Biology . 9 . 1 . 4 . 2010 . 20122292 . 2871523 . 10.1186/jbiol211 . free .