Coordination geometry explained

See main article: Molecular geometry. The coordination geometry of an atom is the geometrical pattern defined by the atoms around the central atom. The term is commonly applied in the field of inorganic chemistry, where diverse structures are observed. The coordination geometry depends on the number, not the type, of ligands bonded to the metal centre as well as their locations. The number of atoms bonded is the coordination number.The geometrical pattern can be described as a polyhedron where the vertices of the polyhedron are the centres of the coordinating atoms in the ligands.[1]

The coordination preference of a metal often varies with its oxidation state. The number of coordination bonds (coordination number) can vary from two in as high as 20 in .

One of the most common coordination geometries is octahedral, where six ligands are coordinated to the metal in a symmetrical distribution, leading to the formation of an octahedron if lines were drawn between the ligands. Other common coordination geometries are tetrahedral and square planar.

Crystal field theory may be used to explain the relative stabilities of transition metal compounds of different coordination geometry, as well as the presence or absence of paramagnetism, whereas VSEPR may be used for complexes of main group element to predict geometry.

Crystallography usage

In a crystal structure the coordination geometry of an atom is the geometrical pattern of coordinating atoms where the definition of coordinating atoms depends on the bonding model used.[1] For example, in the rock salt ionic structure each sodium atom has six near neighbour chloride ions in an octahedral geometry and each chloride has similarly six near neighbour sodium ions in an octahedral geometry. In metals with the body centred cubic (bcc) structure each atom has eight nearest neighbours in a cubic geometry. In metals with the face centred cubic (fcc) structure each atom has twelve nearest neighbours in a cuboctahedral geometry.

Table of coordination geometries

A table of the coordination geometries encountered is shown below with examples of their occurrence in complexes found as discrete units in compounds and coordination spheres around atoms in crystals (where there is no discrete complex).

Coordination number Geometry Examples of discrete (finite) complex Examples in crystals (infinite solids)
2 in [2] Ag in silver cyanide,
Au in AuI
3 trigonal planarO in rutile structure
4tetrahedralZn and S in zinc sulfide, Si in silicon dioxide
4 square planarCuO
5 trigonal bipyramidal
5 square pyramidal in
6 Na and Cl in NaCl
6 trigonal prismaticAs in NiAs, Mo in
7pentagonal bipyramidal in Pa in
7 capped octahedral[3] La in A-
7 capped trigonal prismatic in
8 square antiprismatic in
aqua complex[4]
Thorium(IV) iodide
8 dodecahedral
(note: whilst this is the term generally
used, the correct term is "bisdisphenoid"
or "snub disphenoid" as this polyhedron is a deltahedron)
in Zr in
8bicapped trigonal prismatic[5]
8 Caesium chloride, calcium fluoride
8 hexagonal bipyramidalN in
8 octahedral, trans-bicappedNi in nickel arsenide, NiAs; 6 As neighbours + 2 Ni capping[6]
8 trigonal prismatic, triangular face bicappedCa in
9tricapped trigonal prismatic in potassium nonahydridorhenate
aqua complex
, Th in
9capped square antiprismaticLa in
10 bicapped square antiprismatic
11Th in (is bidentate)
12 icosahedronTh in ion in
12 cuboctahedronatoms in fcc metals e.g. Ca
12 anticuboctahedron (triangular orthobicupola)atoms in hcp metals e.g. Sc
12 bicapped hexagonal antiprismatic

Naming of inorganic compounds

IUPAC have introduced the polyhedral symbol as part of their IUPAC nomenclature of inorganic chemistry 2005 recommendations to describe the geometry around an atom in a compound.[7]
IUCr have proposed a symbol which is shown as a superscript in square brackets in the chemical formula. For example, would be Ca[8cb]F2[4t], where [8cb] means cubic coordination and [4t] means tetrahedral. The equivalent symbols in IUPAC are CU−8 and T−4 respectively.[1]
The IUPAC symbol is applicable to complexes and molecules whereas the IUCr proposal applies to crystalline solids.

See also

Notes and References

  1. Report of the International Union of Crystallography Commission on Crystallographic Nomenclature Subcommittee on the Nomenclature of Inorganic Structure Types . Acta Crystallogr. A . 46 . 1–11 . 1990 . 10.1107/S0108767389008834 . J. Lima-de-Faria . E. Hellner . F. Liebau . E. Makovicky . E. Parthé . free .
  2. Wells A.F. (1984) Structural Inorganic Chemistry 5th edition Oxford Science Publications
  3. "Non-VSEPR" Structures and Bonding in d(0) Systems . Martin . Kaupp . Angew Chem Int Ed Engl . 2001 . 40 . 1 . 3534–3565 . 10.1002/1521-3773(20011001)40:19<3534::AID-ANIE3534>3.0.CO;2-# . 11592184 .
  4. Persson. Ingmar. Hydrated metal ions in aqueous solution: How regular are their structures?. Pure and Applied Chemistry. 82. 10. 2010. 1901–1917. 0033-4545. 10.1351/PAC-CON-09-10-22. free.
  5. Eight-Coordination . Jeremy K. Burdett . Roald Hoffmann . Robert C. Fay . . 1978 . 17 . 9 . 2553–2568 . 10.1021/ic50187a041 .
  6. David G. Pettifor, Bonding and Structure of Molecules and Solids, 1995, Oxford University Press,
  7. NOMENCLATURE OF INORGANIC CHEMISTRY IUPAC Recommendations 2005 ed. N. G. Connelly et al. RSC Publishing http://www.chem.qmul.ac.uk/iupac/bioinorg/