CRAL-TRIO domain explained

CRAL-TRIO domain is a protein structural domain that binds small lipophilic molecules.[1] This domain is named after cellular retinaldehyde-binding protein (CRALBP) and TRIO guanine exchange factor.

CRALB protein carries 11-cis-retinol or 11-cis-retinaldehyde. It modulates interaction of retinoids with visual cycle enzymes. TRIO is involved in coordinating actin remodeling, which is necessary for cell migration and growth.

Other members of the family are alpha-tocopherol transfer protein and phosphatidylinositol-transfer protein (Sec14). They transport their substrates (alpha-tocopherol and phosphatidylinositol or phosphatidylcholine, respectively) between different intracellular membranes. Family also include a guanine nucleotide exchange factor that may function as an effector of RAC1 small G-protein.

The N-terminal domain of yeast ECM25 protein has been identified as containing a lipid binding CRAL-TRIO domain.[2]

Structure

The Sec14 protein was the first CRAL-TRIO domain for which the structure was determined.[3] The structure contains several alpha helices as well as a beta sheet composed of 6 strands. Strands 2,3,4 and 5 form a parallel beta sheet with strands 1 and 6 being anti-parallel. The structure also identified a hydrophobic binding pocket for lipid binding.

Human proteins containing this domain

C20orf121

MOSPD2; PTPN9; RLBP1; RLBP1L1; RLBP1L2; SEC14L1; SEC14L2;SEC14L3
  • SEC14L4; TTPA; NF1;
  • External links

    Notes and References

    1. Panagabko C, Morley S, Hernandez M . Ligand specificity in the CRAL-TRIO protein family . Biochemistry . 42 . 21 . 6467–74 . June 2003 . 12767229 . 10.1021/bi034086v . etal.
    2. Gallego O, Betts MJ, Gvozdenovic-Jeremic J . A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae . Mol. Syst. Biol. . 6 . 1. 430 . November 2010 . 21119626 . 3010107 . 10.1038/msb.2010.87 . etal.
    3. Sha B, Phillips SE, Bankaitis VA, Luo M . Crystal structure of the Saccharomyces cerevisiae phosphatidylinositol-transfer protein . Nature . 391 . 6666 . 506–10 . January 1998 . 9461221 . 10.1038/35179 . 1998Natur.391..506S . 4416317 .