Biliverdin reductase explained

biliverdin reductase
Ec Number:1.3.1.24
Cas Number:9074-10-6
Go Code:0004074
Width:270
biliverdin reductase A
Caption:Crystallographic structure of human biliverdin reductase A based on the coordinates. The enzyme is displayed as a rainbow colored cartoon (N-terminus = blue, C-terminus = red) while the NADP cofactor is displayed as space-filling model (carbon = white, oxygen = red, nitrogen = blue, phosphorus = orange).
Hgncid:1062
Symbol:BLVRA
Altsymbols:BLVR
Entrezgene:644
Omim:109750
Refseq:NM_000712
Uniprot:P53004
Ecnumber:1.3.1.24
Chromosome:7
Arm:p
Band:14
Locussupplementarydata:-cen
biliverdin reductase B
Hgncid:1063
Symbol:BLVRB
Altsymbols:FLR
Entrezgene:645
Omim:600941
Refseq:NM_000713
Uniprot:P30043
Ecnumber:1.3.1.24
Chromosome:19
Arm:q
Band:13.1
Locussupplementarydata:-13.2
Symbol:Biliv-reduc_cat
Biliverdin reductase, catalytic
Pfam:PF09166
Interpro:IPR015249
Scop:1lc0

Biliverdin reductase (BVR) is an enzyme found in all tissues under normal conditions, but especially in reticulo-macrophages of the liver and spleen. BVR facilitates the conversion of biliverdin to bilirubin via the reduction of a double bond between the second and third pyrrole ring into a single bond.

There are two isozymes in humans, each encoded by its own gene, biliverdin reductase A (BLVRA) and biliverdin reductase B (BLVRB).

Mechanism of catalysis

BVR acts on biliverdin by reducing its double-bond between the pyrrole rings into a single-bond.[1] It accomplishes this using NADPH + H+ as an electron donor, forming bilirubin and NADP+ as products.

BVR catalyzes this reaction through an overlapping binding site including Lys18, Lys22, Lys179, Arg183, and Arg185 as key residues.[2] This binding site attaches to biliverdin, and causes its dissociation from heme oxygenase (HO) (which catalyzes reaction of ferric heme --> biliverdin), causing the subsequent reduction to bilirubin.[3]

Structure

BVR is composed of two closely packed domains, between 247 and 415 amino acids long and containing a Rossmann fold.[4] BVR has also been determined to be a zinc-binding protein with each enzyme protein having one strong-binding zinc atom.[5] [6]

The C-terminal half of BVR contains the catalytic domain, which adopts a structure containing a six-stranded beta-sheet that is flanked on one face by several alpha-helices. This domain contains the catalytic active site, which reduces the gamma-methene bridge of the open tetrapyrrole, biliverdin IX alpha, to bilirubin with the concomitant oxidation of a NADH or NADPH cofactor.[7]

Function

BVR works with the biliverdin/bilirubin redox cycle. It converts biliverdin to bilirubin (a strong antioxidant), which is then converted back into biliverdin through the actions of reactive oxygen species (ROS). This cycle allows for the neutralization of ROS, and the reuse of biliverdin products. Biliverdin also is replenished in the cycle with its formation from heme units through heme oxygenase (HO) localized from the endoplasmic reticulum.[8]

Bilirubin, being one of the last products of heme degradation in the liver, is further processed and excreted in bile after conjugation with glucuronic acid.[9] In this way, BVR is essential in many mammals for the disposal of heme catabolites – especially in the fetus where the placental membranes are bilirubin-permeable but not biliverdin-permeable – aiding in the removal of potentially toxic protein build-up.[10]

BVR has also more recently been recognized as a regulator of glucose metabolism and in cell growth and apoptosis control, due to its dual-specificity kinase character.[11] This control over glucose metabolism indicates that BVR may play a role in pathogenesis of multiple metabolic diseases – notably diabetes – by control of the upstream activator of insulin growth factor-1 (IGF-1) and mitogen-activated protein kinase (MAPK) signaling pathway.[12]

Disease relevance

BVR acts as a means to regenerate bilirubin in a repeating redox cycle without significantly modifying the concentration of available bilirubin. With these levels maintained, it appears that BVR represents a new strategy for the treatment of multiple sclerosis and other types of oxidative stress-mediated diseases.[13] The mechanism is due to the amplification of the potent antioxidant actions of bilirubin, as this can ameliorate free radical-mediated diseases.[14]

Studies have shown that the BVR redox cycle is essential in providing physiological cytoprotection. Genetic knock-outs and reduced BVR levels have demonstrated increased formation of ROS, and results in augmented cell death. Cells that experienced a 90% reduction in BVR experienced three times normal ROS levels.[15] Through this protective and amplifying cycle, BVR allows low concentrations of bilirubin to overcome 10,000-fold higher concentrations of ROS.[16]

Notes and References

  1. Rigney E, Mantle TJ . The reaction mechanism of bovine kidney biliverdin reductase . Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology . 957 . 2 . 237–42 . Nov 1988 . 3191141 . 10.1016/0167-4838(88)90278-6 .
  2. Wang J, de Montellano PR . The binding sites on human heme oxygenase-1 for cytochrome p450 reductase and biliverdin reductase . The Journal of Biological Chemistry . 278 . 22 . 20069–76 . May 2003 . 12626517 . 10.1074/jbc.M300989200 . free .
  3. Ahmad Z, Salim M, Maines MD . Human biliverdin reductase is a leucine zipper-like DNA-binding protein and functions in transcriptional activation of heme oxygenase-1 by oxidative stress . The Journal of Biological Chemistry . 277 . 11 . 9226–32 . Mar 2002 . 11773068 . 10.1074/jbc.M108239200 . free .
  4. Bellamacina CR . The nicotinamide dinucleotide binding motif: a comparison of nucleotide binding proteins . FASEB Journal . 10 . 11 . 1257–69 . Sep 1996 . 8836039 . 10.1096/fasebj.10.11.8836039 . free . 24189316 .
  5. Maines MD, Polevoda BV, Huang TJ, McCoubrey WK . Human biliverdin IXalpha reductase is a zinc-metalloprotein. Characterization of purified and Escherichia coli expressed enzymes . European Journal of Biochemistry . 235 . 1–2 . 372–81 . Jan 1996 . 8631357 . 10.1111/j.1432-1033.1996.00372.x . free .
  6. Kikuchi A, Park SY, Miyatake H, Sun D, Sato M, Yoshida T, Shiro Y . Crystal structure of rat biliverdin reductase . Nature Structural Biology . 8 . 3 . 221–5 . Mar 2001 . 11224565 . 10.1038/84955 . 42293456 .
  7. Whitby FG, Phillips JD, Hill CP, McCoubrey W, Maines MD . Crystal structure of a biliverdin IXalpha reductase enzyme-cofactor complex . Journal of Molecular Biology . 319 . 5 . 1199–210 . Jun 2002 . 12079357 . 10.1016/S0022-2836(02)00383-2 .
  8. Kravets A, Hu Z, Miralem T, Torno MD, Maines MD . Biliverdin reductase, a novel regulator for induction of activating transcription factor-2 and heme oxygenase-1 . The Journal of Biological Chemistry . 279 . 19 . 19916–23 . May 2004 . 14988408 . 10.1074/jbc.M314251200 . free .
  9. Bosma PJ, Seppen J, Goldhoorn B, Bakker C, Oude Elferink RP, Chowdhury JR, Chowdhury NR, Jansen PL . Bilirubin UDP-glucuronosyltransferase 1 is the only relevant bilirubin glucuronidating isoform in man . The Journal of Biological Chemistry . 269 . 27 . 17960–4 . Jul 1994 . 10.1016/S0021-9258(17)32403-1 . 8027054 . free .
  10. McDonagh AF, Palma LA, Schmid R . Reduction of biliverdin and placental transfer of bilirubin and biliverdin in the pregnant guinea pig . The Biochemical Journal . 194 . 1 . 273–82 . Jan 1981 . 7305981 . 1162741 . 10.1042/bj1940273.
  11. Florczyk UM, Jozkowicz A, Dulak J . Biliverdin reductase: new features of an old enzyme and its potential therapeutic significance . Pharmacological Reports . 60 . 1 . 38–48 . January–February 2008 . 18276984 . 5536200 .
  12. Kapitulnik J, Maines MD . Pleiotropic functions of biliverdin reductase: cellular signaling and generation of cytoprotective and cytotoxic bilirubin . Trends in Pharmacological Sciences . 30 . 3 . 129–37 . Mar 2009 . 19217170 . 10.1016/j.tips.2008.12.003 .
  13. Maghzal GJ, Leck MC, Collinson E, Li C, Stocker R . Limited role for the bilirubin-biliverdin redox amplification cycle in the cellular antioxidant protection by biliverdin reductase . The Journal of Biological Chemistry . 284 . 43 . 29251–9 . Oct 2009 . 19690164 . 2785555 . 10.1074/jbc.M109.037119 . free .
  14. Liu Y, Li P, Lu J, Xiong W, Oger J, Tetzlaff W, Cynader M . Bilirubin possesses powerful immunomodulatory activity and suppresses experimental autoimmune encephalomyelitis . Journal of Immunology . 181 . 3 . 1887–97 . Aug 2008 . 18641326 . 10.4049/jimmunol.181.3.1887 . free .
  15. Baranano DE, Rao M, Ferris CD, Snyder SH . Biliverdin reductase: a major physiologic cytoprotectant . Proceedings of the National Academy of Sciences of the United States of America . 99 . 25 . 16093–8 . Dec 2002 . 12456881 . 138570 . 10.1073/pnas.252626999 . 2002PNAS...9916093B . free .
  16. Sedlak TW, Snyder SH . Bilirubin benefits: cellular protection by a biliverdin reductase antioxidant cycle . Pediatrics . 113 . 6 . 1776–82 . Jun 2004 . 15173506 . 10.1542/peds.113.6.1776 .