BMC domain explained

Symbol:	BMC
BMC
Pfam:	PF00936
Interpro:	IPR000249
Prosite:	PDOC00876
Cdd:	cd06169

In molecular biology the Bacterial Microcompartment (BMC) domain is a protein domain found in a variety of shell proteins, including CsoS1A, CsoS1B and CsoS1C of Thiobacillus neapolitanus (Halothiobacillus neapolitanus) and their orthologs from other bacteria. These shell proteins form the polyhedral structure of the carboxysome and related structures that plays a metabolic role in bacteria. The BMC domain consists of about 90 amino acid residues, characterized by β-α-β motif connected by a β-hairpin.

The majority of the shell proteins consist of a single BMC domain in each subunit, forming a hexameric structure that assembles to form the flat facets of the polyhedral shell.^[1] To date, two shell proteins were found to consist a tandem BMC domains, of which forms a trimeric structure, giving a pseudo-hexameric appearance.^{[2] [3]}

Notes and References

1. Kerfeld CA, Sawaya MR, Tanaka S, Nguyen CV, Phillips M, Beeby M, Yeates TO . Protein structures forming the shell of primitive bacterial organelles . Science . 309 . 5736 . 936–8 . August 2005 . 16081736 . 10.1126/science.1113397 . 10.1.1.1026.896 . 24561197 .
2. Heldt D, Frank S, Seyedarabi A, Ladikis D, Parsons JB, Warren MJ, Pickersgill RW . 22548122 . Structure of a trimeric bacterial microcompartment shell protein, EtuB, associated with ethanol utilization in Clostridium kluyveri . The Biochemical Journal . 423 . 2 . 199–207 . September 2009 . 19635047 . 10.1042/BJ20090780 .
3. Pang A, Warren MJ, Pickersgill RW . Structure of PduT, a trimeric bacterial microcompartment protein with a 4Fe-4S cluster-binding site . Acta Crystallographica D . 67 . Pt 2 . 91–6 . February 2011 . 21245529 . 10.1107/S0907444910050201 .