Arginine deiminase explained
arginine deiminase |
Ec Number: | 3.5.3.6 |
Cas Number: | 9027-98-9 |
Go Code: | 0016990 |
In enzymology, an arginine deiminase is an enzyme that catalyzes the chemical reaction
L-arginine + H2O
L-citrulline + NH
3Thus, the two substrates of this enzyme are L-arginine and H2O, whereas its two products are L-citrulline and NH3.
This enzyme belongs to the family of hydrolases, those acting on carbon-nitrogen bonds other than peptide bonds, specifically in linear amidines. The systematic name of this enzyme class is L-arginine iminohydrolase. Other names in common use include arginine dihydrolase, citrulline iminase, and L-arginine deiminase. This enzyme participates in arginine and proline metabolism. This enzyme is widely expressed in bacteria, including streptococcus and actinomyces. The bacterial arginine deiminase expression could be regulated by various environmental factors.
Recently, a new enzyme that catalyzes the chemical reaction
L-arginine + 2H2O
L-ornithine + 2NH
3 + CO
2 was identified in
cyanobacteria[1] which should be named as
arginine dihydrolase.
Structural studies
As of late 2007, 7 structures have been solved for this class of enzymes, with PDB accession codes,,,,,, and .
References
- Zhang H, Liu YJ, Nie XQ, Liu LX, Hua Q, Zhao GP, Yang C . The cyanobacterial ornithine-ammonia cycle involves an arginine dihydrolase. . Nature Chemical Biology . 14 . 6 . 575–581 . April 2018 . 29632414 . 10.1038/s41589-018-0038-z . 4937151 .
- OGINSKY EL, GEHRIG RF . 1952 . The arginine dihydrolase system of Streptococcus faecalis. II Properties of arginine desimidase . J. Biol. Chem. . 198 . 799–805 . 12999797 . 2 . 10.1016/S0021-9258(18)55537-X . free .
- LIU Y, BURNE RA . 2009 . Multiple two-component systems modulate alkali generation in Streptococcus gordonii in response to environmental stresses . J. Bacteriol. . 191 . 23 . 7353–7362 . 19783634 . 10.1128/JB.01053-09 . 2786566.
- PETRAK B, SULLIAN L, RETARN S . 1957 . Behavior of purified arginine deiminase from S. faecalis . Arch. Biochem. Biophys. . 69 . 186–197 . 10.1016/0003-9861(57)90485-X . 13445192.
- Book: RATNER S . Advances in Enzymology and Related Areas of Molecular Biology . Urea Synthesis and Metabolism of Arginine and Citrulline . 1954 . Adv. Enzymol. Relat. Subj. Biochem. . Advances in Enzymology - and Related Areas of Molecular Biology . 15 . 319–87 . 10.1002/9780470122600.ch8 . 13158183 . 9780470122600 .
- LIU Y, BURNE RA . 2008 . Environmental and growth phase regulation of the Streptococcus gordonii arginine deiminase genes . Appl Environ Microbiol . 74. 5023–5030 . 10.1128/AEM.00556-08. 18552185 . 16 . 2519279.