| Club: | Pahang |
| Season: | 2016 |
| Manager: | Shaharuddin Rosdi (until 12 March) Razip Ismail (from 17 March) |
| Mgrtitle: | Head Coach |
| Owner: | Tengku Abdul Rahman ibni Sultan Ahmad Shah |
| Ownertitle: | President |
| Chairman: | Dato' Che Nasir Salleh |
| Chrtitle: | Manager |
| Stadium: | Darul Makmur Stadium |
| League: | Super League |
| League Result: | 9th |
| Cup1: | FA Cup |
| Cup1 Result: | Round of 16 |
| Cup2: | Malaysia Cup |
| Cup2 Result: | Group stage |
| League Topscorer: | Dalibor Volaš (6) |
| Season Topscorer: | Dalibor Volaš (7) |
| Prevseason: | 2015 |
| Nextseason: | 2017 |
The 2016 season was Pahang Football Club's first season in the Malaysia Super League after rebranding their name from Pahang FA. The club's first league match was played on 13 February 2016.
| No. | Name | Nat. | Pos. | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Goalkeeper | ||||||||||
| 1 | Mohd Nasril Nourdin | GK | ||||||||
| 22 | Saufi Mohamad | GK | ||||||||
| 51 | Helmi Eliza Elias | GK | ||||||||
| – | Daniel Wafiuddin Sadun | GK | ||||||||
| Defenders | ||||||||||
| 2 | Matthew Davies |  | RB,RWB | |||||||
| 3 | Saiful Nizam Miswan | | CB,RB,LB | |||||||
| 4 | Ridhwan Maidin | CB,DM | ||||||||
| 5 | Zesh Rehman (captain) |  | CB,DM | |||||||
| 14 | Faisal Mohd Rosli | | LB,LWB | |||||||
| 20 | Mohd Shahrizan Salleh | | LB,LWB,LM,CM | |||||||
| 23 | Nejc Potokar |  | CB | |||||||
| 30 | Ashar Al-Aafiz | | RB,RWB,RM | |||||||
| Midfielders | ||||||||||
| 6 | D. Saarvindran | AM,CM,LM,LW | ||||||||
| 8 | Salomon Raj | CM,DMC | ||||||||
| 11 | Muhd Nor Azam Abdul Azih | | CM | |||||||
| 16 | M. Kogileswaran Raj | | AMC,ST | |||||||
| 17 | Rizua Shafiqi | | RM, RW | |||||||
| 18 | Shah Amirul Mohd Zamri | | RM, RW | |||||||
| 21 | Helmi Abdullah | | AM,ST | |||||||
| 24 | R. Dinesh | | LM,LW,LB | |||||||
| – | Hariz Fazrin Mohd Nazri | | LM,LW | |||||||
| Forwards | ||||||||||
| 7 | Faisal Halim | ST | ||||||||
| 9 | Dalibor Volaš | | ST | |||||||
| 10 | German Pacheco |  | LW,AMC, ST | |||||||
| 13 | Faizal Abdul Rani | ST | ||||||||
| 15 | Amirul Kasmuri | ST | ||||||||
| 19 | Mohd Fauzi Roslan | | ST, LW | |||||||
| 26 | Mohd Shafie Zahari | ST | ||||||||
See main article: 2016 Malaysia Super League.
See main article: 2016 Malaysia FA Cup.
See main article: 2016 Malaysia Cup.
| Pos. | Name | From |
|---|---|---|
| Nejc Potokar |  NK Slaven Belupo | |
| Germán Pacheco |  Juan Aurich | |
| Dalibor Volaš | NK Maribor | |
| M. Kogileswaran Raj | Harimau Muda C | |
| Muhd Shah Amirul Mohd Zamri | Harimau Muda C | |
| R. Dinesh | Harimau Muda C | |
| Muhammad Hariz Fazrin Mohd Nazri | Shahzan Muda F.C. | |
| Muhd Helmi Abdullah | Shahzan Muda F.C. | |
| Mohd Daniel Wafiuddin Sadun | Pahang U21 | |
| Mohd Faizal Abdul Rani | Pahang U21 | |
| Mohd Ridhwan Maidin | Pahang U21 | |
| Muhd Amirul Kasmuri | Pahang U21 | |
| Muhd Ashar Al-Aafiz Abdullah | Pahang U21 | |
| Mohd Faisal Abdul Halim | Penang FA U21 | |
| A. Salomon Raj | Selangor FA U21 | |
| Pos. | Name | To |
|---|---|---|
| Matías Conti |  C.D. Universidad de Concepción | |
| Mohd Azamuddin Md Akil | Johor Darul Takzim F.C. | |
| Azidan Sarudin | Kuala Lumpur FA | |
| Mohammad Abdul Aziz Ismail | Melaka United | |
| Mohd Hazri Rozali | Melaka United | |
| Muhammad Syawal Norsam | Melaka United | |
| R. Surendran | Melaka United | |
| Mohd Zaiza Zainal Abidin | PKNS F.C. | |
| Khairul Azhan Khalid | Selangor FA | |
| Mohd Hafiz Kamal | Selangor FA | |
| Mohd Razman Roslan | Selangor FA | |
| R. Gopinathan | Selangor FA | |
 Damion Stewart | Free Agent | |
 Dickson Nwakaeme | Free Agent | |
| Jalaluddin Jaafar | RETIRED | |