| Match | Date | Team | Score | Team | Venue | Attendance |
|---|
| 1 | 2016.02.28 | Shimizu S-Pulse | 0-0 | Ehime FC | IAI Stadium Nihondaira | 15,453 |
| 2 | 2016.03.06 | Ehime FC | 1-1 | Montedio Yamagata | Ningineer Stadium | 5,084 |
| 3 | 2016.03.13 | Hokkaido Consadole Sapporo | 1-1 | Ehime FC | Sapporo Dome | 20,012 |
| 4 | 2016.03.20 | Ehime FC | 0-3 | FC Gifu | Ningineer Stadium | 3,549 |
| 5 | 2016.03.26 | Yokohama FC | 0-0 | Ehime FC | NHK Spring Mitsuzawa Football Stadium | 2,523 |
| 6 | 2016.04.03 | Ehime FC | 2-1 | Giravanz Kitakyushu | Ningineer Stadium | 2,514 |
| 7 | 2016.04.09 | Mito HollyHock | 1-2 | Ehime FC | K's denki Stadium Mito | 4,070 |
| 9 | 2016.04.23 | Ehime FC | 1-0 | Kamatamare Sanuki | Ningineer Stadium | 4,323 |
| 10 | 2016.04.29 | Ehime FC | 0-0 | Matsumoto Yamaga FC | Ningineer Stadium | 4,235 |
| 12 | 2016.05.07 | Ehime FC | 0-0 | Cerezo Osaka | Ningineer Stadium | 7,740 |
| 13 | 2016.05.15 | Ehime FC | 0-1 | Kyoto Sanga FC | Ningineer Stadium | 3,841 |
| 8 | 2016.05.18 | Zweigen Kanazawa | 2-1 | Ehime FC | Ishikawa Athletics Stadium | 1,924 |
| 14 | 2016.05.22 | Fagiano Okayama | 2-1 | Ehime FC | City Light Stadium | 8,486 |
| 15 | 2016.05.29 | Ehime FC | 0-0 | Tokyo Verdy | Ningineer Stadium | 2,019 |
| 16 | 2016.06.04 | Thespakusatsu Gunma | 1-2 | Ehime FC | Shoda Shoyu Stadium Gunma | 4,085 |
| 17 | 2016.06.08 | Renofa Yamaguchi FC | 1-1 | Ehime FC | Ishin Memorial Park Stadium | 3,629 |
| 18 | 2016.06.12 | Ehime FC | 0-2 | Tokushima Vortis | Ningineer Stadium | 4,460 |
| 19 | 2016.06.19 | FC Machida Zelvia | 0-1 | Ehime FC | Machida Stadium | 3,481 |
| 20 | 2016.06.26 | Ehime FC | 0-1 | V-Varen Nagasaki | Ningineer Stadium | 2,670 |
| 21 | 2016.07.03 | Ehime FC | 2-1 | JEF United Chiba | Ningineer Stadium | 2,829 |
| 22 | 2016.07.10 | Kamatamare Sanuki | 1-1 | Ehime FC | Pikara Stadium | 4,539 |
| 23 | 2016.07.16 | Ehime FC | 2-2 | Shimizu S-Pulse | Ningineer Stadium | 4,897 |
| 24 | 2016.07.20 | Ehime FC | 1-1 | Renofa Yamaguchi FC | Ningineer Stadium | 2,835 |
| 25 | 2016.07.24 | Tokushima Vortis | 2-0 | Ehime FC | Pocarisweat Stadium | 8,962 |
| 26 | 2016.07.31 | Ehime FC | 1-0 | Thespakusatsu Gunma | Ningineer Stadium | 3,278 |
| 27 | 2016.08.07 | JEF United Chiba | 0-0 | Ehime FC | Fukuda Denshi Arena | 8,295 |
| 28 | 2016.08.11 | Ehime FC | 1-1 | Fagiano Okayama | Ningineer Stadium | 5,747 |
| 29 | 2016.08.14 | Giravanz Kitakyushu | 1-1 | Ehime FC | Honjo Stadium | 1,958 |
| 30 | 2016.08.21 | V-Varen Nagasaki | 1-1 | Ehime FC | Transcosmos Stadium Nagasaki | 4,850 |
| 11 | 2016.08.31 | Roasso Kumamoto | 1-2 | Ehime FC | Umakana-Yokana Stadium | 2,562 |
| 31 | 2016.09.11 | Ehime FC | 1-0 | Roasso Kumamoto | Ningineer Stadium | 2,955 |
| 32 | 2016.09.18 | FC Gifu | 2-1 | Ehime FC | Gifu Nagaragawa Stadium | 3,549 |
| 33 | 2016.09.25 | Ehime FC | 1-1 | Mito HollyHock | Ningineer Stadium | 2,342 |
| 34 | 2016.10.02 | Ehime FC | 3-0 | Yokohama FC | Ningineer Stadium | 8,215 |
| 35 | 2016.10.08 | Montedio Yamagata | 2-2 | Ehime FC | ND Soft Stadium Yamagata | 3,189 |
| 36 | 2016.10.16 | Ehime FC | 2-2 | Hokkaido Consadole Sapporo | Ningineer Stadium | 2,916 |
| 37 | 2016.10.23 | Matsumoto Yamaga FC | 1-1 | Ehime FC | Matsumotodaira Park Stadium | 13,605 |
| 38 | 2016.10.30 | Tokyo Verdy | 1-1 | Ehime FC | Ajinomoto Stadium | 6,931 |
| 39 | 2016.11.03 | Ehime FC | 3-1 | Zweigen Kanazawa | Ningineer Stadium | 4,895 |
| 40 | 2016.11.06 | Cerezo Osaka | 1-0 | Ehime FC | Kincho Stadium | 8,714 |
| 41 | 2016.11.12 | Kyoto Sanga FC | 0-1 | Ehime FC | Kyoto Nishikyogoku Athletic Stadium | 7,193 |
| 42 | 2016.11.20 | Ehime FC | 0-1 | FC Machida Zelvia | Ningineer Stadium | 4,519 | |
Takashi Kiyama