| Club: | Tom Tomsk |
| Season: | 2013–14 |
| Manager: | Anatoli Davydov until 15 September 2013 Vasili Baskakov from 15 September 2013 |
| Chairman: | Artyom Fomenko |
| Stadium: | Trud Stadium |
| League: | Russian Premier League |
| League Result: | 13th Relegated |
| Cup1: | Russian Cup |
| Cup1 Result: | Quarter-finals vs Luch-Energiya Vladivostok. |
| League Topscorer: | Kirill Panchenko (7) |
| Season Topscorer: | Kirill Panchenko (8) |
| Highest Attendance: | 10,000 vs Spartak Moscow 3 May 2014 |
| Lowest Attendance: | 700 vs Luch-Energiya Vladivostok 26 March 2014 |
| Average Attendance: | 5,111 |
| Prevseason: | 2012–13 |
| Pattern B1: | _tomtomsk1314h |
| Leftarm1: | 0e4e2d |
| Rightarm1: | 0e4e2d |
| Shorts1: | 0e4e2d |
| Socks1: | 0e4e2d |
| Pattern B2: | _oxford1011t |
| Leftarm2: | FFFFFF |
| Body2: | FFFFFF |
| Rightarm2: | FFFFFF |
| Shorts2: | FFFFFF |
| Socks2: | FFFFFF |
The 2013–14 FC Tom Tomsk season was the club's 1st season back in the Russian Premier League, the highest tier of football in Russia, following their relegation at the end of the 2011–12 season. They finished the season in 13th place, qualifying for the Relegation play-offs where they lost over two legs to FC Ufa and were relegated from the Premier League. Tom Tomsk also took part in the 2013–14 Russian Cup, where they reached the Quarter-finals, losing to Luch-Energiya Vladivostok.
See main article: List of Russian football transfers summer 2013. In:[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] Out:[16] [17] [18]
In:Out:[19]
See main article: 2013–14 Russian Premier League.
See main article: 2013–14 Russian Cup.
|-|colspan="14"|Players away from the club on loan:|-|colspan="14"|Players who appeared for Tom Tomsk that left during the season:|}
| width=60 | Place | width=60 | Position | width=60 | Nation | width=60 | Number | width=150 | Name | width=150 | Russian Premier League | width=150 | Relegation Play-offs | width=150 | Russian Cup | width=80 | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | FW |  | 88 | Kirill Panchenko | 7 | 1 | 0 | 8 | |||||||||
| 2 | FW | | 9 | Igor Portnyagin | 4 | 1 | 2 | 7 | |||||||||
| 3 | FW |  | 29 | Jan Holenda | 3 | 0 | 0 | 3 | |||||||||
| 4 | DF | | 33 | Vladimir Rykov | 2 | 0 | 0 | 2 | |||||||||
| MF | | 4 | Yevgeni Bashkirov | 1 | 1 | 0 | 2 | ||||||||||
| FW | | 10 | Pavel Golyshev | 1 | 1 | 0 | 2 | ||||||||||
| DF |  | 30 | Kornel Saláta | 1 | 0 | 1 | 2 | ||||||||||
| 8 | MF | | 11 | Pavel Ignatovich | 1 | 0 | 0 | 1 | |||||||||
| DF |  | 21 | Maksim Bardachow | 1 | 0 | 0 | 1 | ||||||||||
| MF | | 34 | Renat Sabitov | 1 | 0 | 0 | 1 | ||||||||||
| MF | | 13 | Pavel Nyakhaychyk | 1 | 0 | 0 | 1 | ||||||||||
| MF | | 19 | Maksim Astafyev | 0 | 0 | 1 | 1 | ||||||||||
| TOTALS | 23 | 4 | 4 | 31 | |||||||||||||
| Number | Nation | Position | Name | Russian Premier League | Relegation Play-offs | Russian Cup | Total | ||||||||
| width=60 style="background: #FFEE99" | width=60 style="background: #FF8888" | width=60 style="background: #FFEE99" | width=60 style="background: #FF8888" | width=60 style="background: #FFEE99" | width=60 style="background: #FF8888" | width=60 style="background: #FFEE99" | width=60 style="background: #FF8888" | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 |  | GK | Mladen Božović | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | ||||
| 3 | | DF | Aleksei Aravin | 2 | 0 | 0 | 0 | 2 | 0 | 4 | 0 | ||||
| 4 | | MF | Yevgeni Bashkirov | 6 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | ||||
| 5 | | DF | Syarhey Amelyanchuk | 4 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | ||||
| 6 | MF | Gabriel Mureșan | 5 | 0 | 0 | 0 | 1 | 0 | 6 | 0 | |||||
| 7 | | MF | Valeri Sorokin | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | ||||
| 9 | | FW | Igor Portnyagin | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | ||||
| 10 | | FW | Pavel Golyshev | 2 | 1 | 0 | 0 | 0 | 0 | 2 | 1 | ||||
| 11 | | MF | Pavel Ignatovich | 6 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | ||||
| 13 | | MF | Pavel Nyakhaychyk | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | ||||
| 14 | | MF | Aleksandr Cherevko | 0 | 0 | 1 | 0 | 1 | 0 | 2 | 0 | ||||
| 15 | | DF | Vladimir Kisenkov | 6 | 1 | 0 | 0 | 0 | 0 | 6 | 1 | ||||
| 18 | | GK | Petr Vašek | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | ||||
| 20 | DF | Zhivko Milanov | 9 | 0 | 0 | 0 | 0 | 0 | 9 | 0 | |||||
| 21 | | DF | Maksim Bardachow | 5 | 1 | 0 | 0 | 0 | 0 | 5 | 1 | ||||
| 25 |  | GK | Ilie Cebanu | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | ||||
| 29 | | FW | Jan Holenda | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | ||||
| 30 | | DF | Kornel Saláta | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | ||||
| 33 | | DF | Vladimir Rykov | 8 | 1 | 0 | 0 | 0 | 0 | 8 | 1 | ||||
| 37 | | MF | Mikhail Komkov | 1 | 0 | 0 | 0 | 2 | 0 | 3 | 0 | ||||
| 77 |  | MF | Ádám Pintér | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | ||||
| 88 | | FW | Kirill Panchenko | 4 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | ||||
| TOTALS | 68 | 6 | 1 | 0 | 7 | 0 | 76 | 6 | |||||||