| Czech Cup | |
| Year: | 2008–09 |
| Other Titles: | Pohár ČMFS |
| Num Teams: | 129 |
| Defending Champions: | Sparta Prague |
| Champions: | Teplice |
| Runner-Up: | Slovácko |
| Top Goal Scorer: | David Střihavka Ladislav Volešák (5 goals) |
| Prevseason: | 2007–08 |
| Nextseason: | 2009–10 |
The 2008–09 Czech Cup was the 16thh edition of the annual football knockout tournament organized by the Czech Football Association of the Czech Republic. It began on 20 July 2008 with the preliminary round and ended with the final on 27 May 2009.
Teplice prevailed in Stadion Evžena Rošického, Prague at the 27 May 2009 Cup defeating 1. FC Slovácko, 1–0. 4,820 in attendance.
| Round | Clubs remaining | Clubs involved | Winners from previous round | New entries this round | Leagues entering this round | |
|---|---|---|---|---|---|---|
| 129 | 34 | none | 34 | Levels 4 and 5 in football league pyramid | ||
| 112 | 96 | 17 | 79 | Czech 2. Liga Bohemian Football League Moravian-Silesian Football League Level 4 in football league pyramid | ||
| Second round | 64 | 64 | 48 | 16 | Czech First League | |
| 32 | 32 | 32 | none | none | ||
| 16 | 16 | 16 | none | none | ||
| 8 | 8 | 8 | none | none | ||
| 4 | 4 | 4 | none | none | ||
| 2 | 2 | 2 | none | none |
|colspan="3" style="background-color:#97DEFF"|20 July 2008
|colspan="3" style="background-color:#97DEFF"|22 July 2008|-|colspan="3" style="background-color:#97DEFF"|23 July 2008|-|colspan="3" style="background-color:#97DEFF"|26 July 2008|-|colspan="3" style="background-color:#97DEFF"|27 July 2008
|colspan="3" style="background-color:#97DEFF"|2 August 2008|-|colspan="3" style="background-color:#97DEFF"|5 August 2008|-|colspan="3" style="background-color:#97DEFF"|27 August 2008|-|colspan="3" style="background-color:#97DEFF"|2 September 2008|-|colspan="3" style="background-color:#97DEFF"|3 September 2008 |-|colspan="3" style="background-color:#97DEFF"|4 September 2008|-|colspan="3" style="background-color:#97DEFF"|9 September 2008
|colspan="3" style="background-color:#97DEFF"|23 September 2008|-|colspan="3" style="background-color:#97DEFF"|24 September 2008|-|colspan="3" style="background-color:#97DEFF"|25 September 2008|-|colspan="3" style="background-color:#97DEFF"|30 September 2008|-|colspan="3" style="background-color:#97DEFF"|1 October 2008|-|colspan="3" style="background-color:#97DEFF"|7 October 2008
|colspan="3" style="background-color:#97DEFF"|22 October 2008|-|colspan="3" style="background-color:#97DEFF"|28 October 2008|-|colspan="3" style="background-color:#97DEFF"|29 October 2008 |-|colspan="3" style="background-color:#97DEFF"|30 October 2008
The first legs were played on 8 and 9 April 2009. The second legs were played on 22 and 23 April 2009.
The first legs were played on 6 and 7 May 2009. The second legs were played on 13 May 2009.