| Moldovan Cup | |
| Year: | 1999–2000 |
| Other Title: | Cupa Moldovei |
| Country: | Moldova |
| Champions: | Constructorul |
| Runner-Up: | Zimbru |
| Prevseason: | 1998–99 |
| Nextseason: | 2000–01 |
The 1999–2000 Moldovan Cup was the ninth season of the Moldovan annual football cup competition. The competition ended with the final held on 24 May 2000.
The first legs were played on 20 October 1999. The second legs were played on 3 November 1999.
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The first legs were played on 15 March 2000. The second legs were played on 5 April 2000.
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The first legs were played on 19 April 2000. The second legs were played on 3 May 2000.
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