| Greek Cup | |
| Year: | 1940–41 |
| Country: | Greece |
| Num Teams: | 79 |
| Defending Champions: | Panathinaikos |
| Winners: | None |
| Second: | None |
| Matches: | 18 |
| Goals: | 94 |
| Prev Season: | 1939–40 |
| Next Season: | 1946–47 |
The 1940–41 Greek Football Cup was never completed, due to the invasion of Greece by Italy. Only the First Round was carried out.
|-|colspan="5" style="background-color:#D0D0D0" align=center|Athens Football Clubs Association||colspan="2" ||colspan="2" rowspan="3" |-|colspan="5" style="background-color:#D0D0D0" align=center|Piraeus Football Clubs Association||colspan="2" rowspan="3" |-|colspan="5" style="background-color:#D0D0D0" align=center|Thessaly Football Clubs Association||colspan="2" rowspan="5" |-|colspan="5" style="background-color:#D0D0D0" align=center|Macedonia Football Clubs Association||colspan="2" rowspan="3" |-|colspan="5" style="background-color:#D0D0D0" align=center|Eastern Macedonia/Thrace Football Clubs Association||colspan="2" rowspan="4" |-|colspan="5" style="background-color:#D0D0D0" align=center|Patras Football Clubs Association||colspan="2" rowspan="5" |}